RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 ST20Q9HBF5 79 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 AK3Q9UIJ7 227 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 HLA-DRB4X5D2U9 266 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 COL5A1P20908 1838 aaPredicted RBP4.31□□□□□ -1.72
CNGA1-202ENST00000402813 TRBV20-1A0A075B6N2 111 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 H3BRM9 83 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 M0R1X1 148 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 AGPAT2O15120 278 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 CST7O76096 145 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 LINC00869P0C866 280 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 TRGC1P0CF51 173 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 RPS10P46783 165 aaKnown RBP4.31□□□□□ -1.72
CNGA1-202ENST00000402813 HINT1P49773 126 aaPredicted RBP4.31□□□□□ -1.72
CNGA1-202ENST00000402813 LSM3P62310 102 aaKnown RBP4.31□□□□□ -1.72
CNGA1-202ENST00000402813 SEC11AP67812 179 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 LGALS9BQ3B8N2 356 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 SLC48A1Q6P1K1 146 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 RPS27LQ71UM5 84 aaKnown RBP4.31□□□□□ -1.72
CNGA1-202ENST00000402813 MS4A6EQ96DS6 147 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 CACFD1Q9UGQ2 172 aa4.31□□□□□ -1.72
CNGA1-202ENST00000402813 SCN2AQ99250 2005 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 TRBV20OR9-2A0A075B6H5 130 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 A0A087WWC5 75 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 IGHV1-69DA0A0B4J2H0 117 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 IGKV1-8A0A0C4DH67 115 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 GYPAP02724 150 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 SLC25A5P05141 298 aaKnown RBP4.3□□□□□ -1.72
CNGA1-202ENST00000402813 CXCL5P42830 114 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 NCBP2P52298 156 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNGA1-202ENST00000402813 ZNF138P52744 262 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 KIAA0087Q14695 138 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 PCSK4Q6UW60 755 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 CLECL1Q8IZS7 167 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 APCDD1LQ8NCL9 501 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 VSTM2AQ8TAG5 236 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 NABP1Q96AH0 204 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 CKLFQ9UBR5 152 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 INSL5Q9Y5Q6 135 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 SERP1Q9Y6X1 66 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 IGKV1-27A0A075B6S5 117 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 IGLL5B9A064 214 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 K7N7A8 449 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 HCRTO43612 131 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 TRACP01848 142 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 FABP2P12104 132 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 C1orf100Q5SVJ3 147 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 LINC01545Q5VT33 79 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 OR10P1Q8NGE3 313 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 GOLGA2P5Q9HBQ8 144 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 MSRB1Q9NZV6 116 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 TP73-AS1Q9UF72 201 aa4.3□□□□□ -1.72
CNGA1-202ENST00000402813 RAI1Q7Z5J4 1906 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 TRAV19A0A0A6YYK7 116 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 A0A0D9SEW6 157 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 C7orf77A4D0Y5 90 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 M0R129 80 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 EGR2P11161 476 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 LGALS3P17931 250 aaKnown RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 HLA-DMBP28068 263 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 ZNF80P51504 273 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 IGLV3-21P80748 117 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 WDR38Q5JTN6 314 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 WFDC11Q8NEX6 87 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 IGHV4-61A0A0C4DH41 118 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 IGHV4-59P01825 116 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 RBP4P02753 201 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 TPT1P13693 172 aaKnown RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 ADIRFQ15847 76 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 ZNF660Q6AZW8 331 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 LYPD4Q6UWN0 246 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 OR2T35Q8NGX2 323 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 SCGB1C1Q8TD33 95 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 RHNO1Q9BSD3 238 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 CXCL16Q9H2A7 254 aa4.29□□□□□ -1.72
CNGA1-202ENST00000402813 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-202ENST00000402813 IGKV1D-43A0A0B4J1Z2 117 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 KANTRA0A1W2PQU2 76 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 H3BT86 120 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 COX7A2LO14548 114 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 NDUFB3O43676 98 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 IGLL1P15814 213 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 SRSF3P84103 164 aaKnown RBP4.28□□□□□ -1.72
CNGA1-202ENST00000402813 BVES-AS1Q5T3Y7 98 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 SLC25A42Q86VD7 318 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 OR5C1Q8NGR4 320 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 RPS10P5Q9NQ39 176 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 TMEM242Q9NWH2 141 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 RABAC1Q9UI14 185 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 TRGV5A0A0B4J1U4 118 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 TRBV27A0A0K0K1C4 114 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 ZNF705FA8MVS1 300 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-202ENST00000402813 ZNF705DP0CH99 300 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-202ENST00000402813 ZNF705BP0CI00 300 aaPredicted RBP4.28□□□□□ -1.72
CNGA1-202ENST00000402813 ZNF329Q86UD4 541 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 FLVCR1-AS1Q8TAF5 88 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 LSM10Q969L4 123 aaKnown RBP4.28□□□□□ -1.72
CNGA1-202ENST00000402813 MUCL1Q96DR8 90 aa4.28□□□□□ -1.72
CNGA1-202ENST00000402813 A0A1W2PQD3 144 aa4.28□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms