RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 DSCR9P59020 149 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 LCTP09848 1927 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 H0YIZ8 118 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 LRRK1Q38SD2 2015 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
VAPA-202ENST00000400000 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 E7EQL1 145 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 Q6AWC8 147 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 GFI1Q99684 422 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.23□□□□□ -0.61
VAPA-202ENST00000400000 PAX9P55771 341 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
VAPA-202ENST00000400000 H0YJW9 148 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 PFN2P35080 140 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 C8orf49Q96NF6 230 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 PLSCR4Q9NRQ2 329 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 LOC102723996A0A087X1L8 192 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 LINC00473A8K010 186 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 ORMDL2Q53FV1 153 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 VWC2LB2RUY7 222 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 LHBP01229 141 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 A0A087X0K7 114 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
VAPA-202ENST00000400000 GGTLC1Q9BX51 225 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 A0A1W2PRE2 83 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 GAGE12BA1L429 117 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 ITGB1BP1O14713 200 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 GAGE7O76087 117 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 GAGE12FP0CL80 117 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 GAGE12GP0CL81 117 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 GAGE12IP0CL82 117 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 F8WEM9 126 aa11.21□□□□□ -0.61
VAPA-202ENST00000400000 GREB1LQ9C091 1923 aaPredicted RBP11.21□□□□□ -0.62
VAPA-202ENST00000400000 IGLV3-12A0A075B6K2 115 aa11.21□□□□□ -0.62
VAPA-202ENST00000400000 G3V318 75 aa11.21□□□□□ -0.62
VAPA-202ENST00000400000 C20orf204Q6ZNR8 217 aa11.21□□□□□ -0.62
VAPA-202ENST00000400000 BTCP35070 178 aa11.21□□□□□ -0.62
VAPA-202ENST00000400000 DUX4L9Q6RFH8 374 aaPredicted RBP11.21□□□□□ -0.62
VAPA-202ENST00000400000 ANAPC13Q9BS18 74 aa11.21□□□□□ -0.62
VAPA-202ENST00000400000 CXCL1P09341 107 aa11.21□□□□□ -0.62
VAPA-202ENST00000400000 STAG3L3P0CL85 134 aa11.21□□□□□ -0.62
VAPA-202ENST00000400000 IGKV1-16P04430 117 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 SPTBN1Q01082 2364 aaKnown RBP11.2□□□□□ -0.62
VAPA-202ENST00000400000 NXPH4O95158 308 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 LINC00271P0C7V0 271 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 DAD1P61803 113 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 SAMD5Q5TGI4 173 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 SLC25A48Q6ZT89 311 aaKnown RBP11.2□□□□□ -0.62
VAPA-202ENST00000400000 C5orf30Q96GV9 206 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
VAPA-202ENST00000400000 ZNF362Q5T0B9 420 aaPredicted RBP11.2□□□□□ -0.62
VAPA-202ENST00000400000 NABP1Q96AH0 204 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 J3QKU1 62 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
VAPA-202ENST00000400000 ABCA4P78363 2273 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
VAPA-202ENST00000400000 A0A1B0GW15 77 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 NTF4P34130 210 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 AMN1Q8IY45 258 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 ORAOV1Q8WV07 137 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 TRAV26-2A0A0B4J265 109 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 F2Z2F3 143 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 LYPD3O95274 346 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 NEGR1Q7Z3B1 354 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 TSKUQ8WUA8 353 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 IGKV1D-17A0A075B6S4 117 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 LY6G6FQ5SQ64 297 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 SBF1O95248 1867 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 GAGE6Q13070 117 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 ATXN8Q156A1 80 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 TMEM170AQ8WVE7 144 aa11.19□□□□□ -0.62
VAPA-202ENST00000400000 ESDP10768 282 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 RSPO3Q9BXY4 272 aaPredicted RBP11.18□□□□□ -0.62
VAPA-202ENST00000400000 IFI6P09912 130 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 ZNF479Q96JC4 524 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 RNF114Q9Y508 228 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 SS18Q15532 418 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 SRRM5B3KS81 715 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 CRYGSP22914 178 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
VAPA-202ENST00000400000 CEACAM8P31997 349 aaPredicted RBP11.17□□□□□ -0.62
VAPA-202ENST00000400000 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 GLRX5Q86SX6 157 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 MS4A6AQ9H2W1 248 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 WDR90Q96KV7 1748 aa11.17□□□□□ -0.62
VAPA-202ENST00000400000 A0A0J9YY99 117 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms