RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 UQCC3Q6UW78 93 aa13.22□□□□□ -0.29
SMIM11A-202ENST00000399295 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
SMIM11A-202ENST00000399295 OR2K2Q8NGT1 345 aa13.22□□□□□ -0.29
SMIM11A-202ENST00000399295 TMEM190Q8WZ59 177 aa13.22□□□□□ -0.29
SMIM11A-202ENST00000399295 RAB24Q969Q5 203 aa13.22□□□□□ -0.29
SMIM11A-202ENST00000399295 DNAJC4Q9NNZ3 241 aa13.22□□□□□ -0.29
SMIM11A-202ENST00000399295 OR5G3P0C626 314 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 GATA2P23769 480 aaPredicted RBP13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 PMS2P11Q13670 270 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 DEFB114Q30KQ6 69 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 CD300EQ496F6 205 aaPredicted RBP13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 GCSAMLQ5JQS6 135 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 LCN15Q6UWW0 184 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 OR51G1Q8NGK1 321 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 Q8WTZ3 238 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 C20orf24Q9BUV8 137 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 PBDC1Q9BVG4 233 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 SLC25A22Q9H936 323 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 TECRQ9NZ01 308 aaKnown RBP13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 FUT9Q9Y231 359 aa13.21□□□□□ -0.29
SMIM11A-202ENST00000399295 IZUMO1RA6ND01 250 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 ATP6V1G1O75348 118 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 HYPMO75409 117 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 PSG1P11464 419 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 PPT1P50897 306 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 TAS2R45P59539 299 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 C10orf113Q5VZT2 155 aa13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 DAZ1Q9NQZ3 744 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-202ENST00000399295 IFNA1P01562 189 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 STAG3L2P0CL84 134 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 STAG3L3P0CL85 134 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 C8orf88P0DMB2 117 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 S100A7P31151 101 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 TAGLN2P37802 199 aaKnown RBP13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 B9D2Q9BPU9 175 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 SMDT1Q9H4I9 107 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 MLXQ9UH92 298 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 SMAD5-AS1Q9Y6J3 95 aa13.19□□□□□ -0.3
SMIM11A-202ENST00000399295 IGHV3OR16-8A0A075B7F1 116 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 K7EMT4 169 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 CXorf1O96002 111 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 PSMB3P49720 205 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 ZNF600Q6ZNG1 722 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 FAM210AQ96ND0 272 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 CITED4Q96RK1 184 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 SEPSECSQ9HD40 501 aaKnown RBP13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
SMIM11A-202ENST00000399295 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 NHLRC4P0CG21 123 aaPredicted RBP13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 ORM2P19652 201 aa13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 S100A1P23297 94 aa13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 PEA15Q15121 130 aa13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 KHDC3LQ587J8 217 aa13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 OR1B1Q8NGR6 318 aa13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
SMIM11A-202ENST00000399295 A0A1B0GV50 99 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 FGF8P55075 233 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 LYZP61626 148 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 GUCA2BQ16661 112 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 GUK1Q16774 197 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 PATE2Q6UY27 113 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 PQLC2Q6ZP29 291 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 GTSCR1Q86UQ5 136 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 Q8N1Y9 231 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 STXBP6Q8NFX7 210 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
SMIM11A-202ENST00000399295 RBFOX3A6NFN3 312 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 IL4P05112 153 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 CCL20P78556 96 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 MIR17HGQ75NE6 70 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 TMEM61Q8N0U2 210 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 EIF5A2Q9GZV4 153 aaKnown RBP13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 DOK5Q9P104 306 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 PUS1Q9Y606 427 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
SMIM11A-202ENST00000399295 HMGB3O15347 200 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-202ENST00000399295 ARL14EPLP0DKL9 152 aa13.14□□□□□ -0.31
SMIM11A-202ENST00000399295 SPATA31B1PQ5VZV4 182 aa13.14□□□□□ -0.31
SMIM11A-202ENST00000399295 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
SMIM11A-202ENST00000399295 TMEM167BQ9NRX6 74 aa13.14□□□□□ -0.31
SMIM11A-202ENST00000399295 GNG13Q9P2W3 67 aa13.14□□□□□ -0.31
SMIM11A-202ENST00000399295 SMPXQ9UHP9 88 aa13.14□□□□□ -0.31
SMIM11A-202ENST00000399295 TRAV25A0A0B4J276 109 aa13.13□□□□□ -0.31
SMIM11A-202ENST00000399295 IGHV7-4-1A0A0J9YVY3 117 aa13.13□□□□□ -0.31
SMIM11A-202ENST00000399295 NDUFS6O75380 124 aaKnown RBP13.13□□□□□ -0.31
SMIM11A-202ENST00000399295 CD5P06127 495 aa13.13□□□□□ -0.31
SMIM11A-202ENST00000399295 TOR2AQ5JU69 321 aa13.13□□□□□ -0.31
SMIM11A-202ENST00000399295 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
SMIM11A-202ENST00000399295 IQCF2Q8IXL9 164 aa13.13□□□□□ -0.31
SMIM11A-202ENST00000399295 TREM1Q9NP99 234 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms