RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HILPDAQ9Y5L2 63 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 INSIG2Q9Y5U4 225 aa4.02□□□□□ -1.77
SMAD4-202ENST00000398417 KIAA1671Q9BY89 1806 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 SRRM4A7MD48 611 aaKnown RBP4.01□□□□□ -1.77
SMAD4-202ENST00000398417 C17orf100A8MU93 164 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 RRN3P1Q2M238 152 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 SEM1Q6ZVN7 128 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 TCF24Q7RTU0 167 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 FAM19A2Q8N3H0 131 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 ST6GALNAC3Q8NDV1 305 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 LEPP41159 167 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 VWC2Q2TAL6 325 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 DNLZQ5SXM8 178 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 LINC00305Q7Z4B0 112 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 PRNTQ86SH4 94 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 PRDM13Q9H4Q3 707 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 IGKV3OR2-268A0A0C4DH90 116 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 MFAP2P55001 183 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 FOXA3P55318 350 aaPredicted RBP4.01□□□□□ -1.77
SMAD4-202ENST00000398417 NUTF2P61970 127 aaKnown RBP4.01□□□□□ -1.77
SMAD4-202ENST00000398417 PRR20EP86478 221 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 PRR20CP86479 221 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 PRR20DP86480 221 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 PRR20BP86481 221 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 PRR20AP86496 221 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 C2orf83Q53S99 150 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 OR52E5Q8NH55 327 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 OR5R1Q8NH85 324 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV1-69-2A0A0G2JMI3 117 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 E9PLD3 99 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 GZMBP10144 247 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 MEF2CQ06413 473 aaPredicted RBP4.01□□□□□ -1.77
SMAD4-202ENST00000398417 SPATA45Q537H7 98 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 SUMO4Q6EEV6 95 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 WNT10AQ9GZT5 417 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 MEGF9Q9H1U4 602 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 TPSG1Q9NRR2 321 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 FOXA2Q9Y261 457 aaPredicted RBP4.01□□□□□ -1.77
SMAD4-202ENST00000398417 IGKV1-16P04430 117 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 P0C879 139 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM167AQ8TBQ9 72 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 ST6GALNAC6Q969X2 333 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 C20orf173Q96LM9 149 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 CCDC140Q96MF4 163 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 CLPSL1A2RUU4 121 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 CKS1BP61024 79 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 BSPH1Q075Z2 132 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 SPANXCQ9NY87 97 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 FBXL7Q9UJT9 491 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 LINC00312Q9Y6C7 94 aa4.01□□□□□ -1.77
SMAD4-202ENST00000398417 P01737 135 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 LOXL3P58215 753 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 EIF4EBP1Q13541 118 aaPredicted RBP4□□□□□ -1.77
SMAD4-202ENST00000398417 OR4F17Q8NGA8 305 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 FAM90A9PA6NNJ1 464 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 M0QZK8 103 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 PPIAL4GP0DN37 164 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 CD24P25063 80 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 PRR30Q53SZ7 412 aaPredicted RBP4□□□□□ -1.77
SMAD4-202ENST00000398417 C1orf174Q8IYL3 243 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 MUC21A0A0G2JKD1 596 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 MUC21A0A140T8X8 626 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 IZUMO1RA6ND01 250 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 LYRM9A8MSI8 78 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 H0YJW9 148 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 PEX7O00628 323 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 MMDQ15546 238 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 MUC21Q5SSG8 566 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 ZNF562Q6V9R5 426 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 OR8B3Q8NGG8 313 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 DDB2Q92466 427 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 OR8B2Q96RD0 313 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 MRPL32Q9BYC8 188 aaKnown RBP4□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM160Q9NX00 188 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 SIGLEC8Q9NYZ4 499 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 EDN2P20800 178 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 CDKN1AP38936 164 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 HERVK_113P61574 105 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 C22orf34Q6ZV56 151 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 NRN1Q9NPD7 142 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 AMMECR1Q9Y4X0 333 aaPredicted RBP4□□□□□ -1.77
SMAD4-202ENST00000398417 MUC22E2RYF6 1773 aaPredicted RBP4□□□□□ -1.77
SMAD4-202ENST00000398417 FAM229AH3BQW9 127 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM116Q8NCL8 245 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 FAM222BQ8WU58 562 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 MDFIQ99750 246 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 CACNA1HO95180 2353 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 CENPVL3A0A0U1RRI6 287 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 YPEL3P61236 119 aaPredicted RBP4□□□□□ -1.77
SMAD4-202ENST00000398417 FOXL1Q12952 345 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM183BQ1AE95 376 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 NEU1Q99519 415 aa4□□□□□ -1.77
SMAD4-202ENST00000398417 TBL2Q9Y4P3 447 aaKnown RBP4□□□□□ -1.77
SMAD4-202ENST00000398417 TRAV23DV6A0A075B6W5 121 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 A0A0G2JNJ9 132 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 M0R3E3 92 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 HTR1DP28221 377 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 IGFL4Q6B9Z1 124 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 CCDC144NLQ6NUI1 221 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 PATE2Q6UY27 113 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms