RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SLC25A39Q9BZJ4 359 aaPredicted RBP13.12□□□□□ -0.31
FXN-203ENST00000396366 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
FXN-203ENST00000396366 DEFB131BA0A096LNP1 70 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 H3BRN7 92 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 CCSO14618 274 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 MEOX2P50222 304 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 FGL1Q08830 312 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 ARL16Q0P5N6 197 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 RNF182Q8N6D2 247 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 UHRF2Q96PU4 802 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 NEU1Q99519 415 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 C20orf85Q9H1P6 137 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 PLA2G2EQ9NZK7 142 aa13.11□□□□□ -0.31
FXN-203ENST00000396366 RCL1Q9Y2P8 373 aaKnown RBP13.11□□□□□ -0.31
FXN-203ENST00000396366 MBPP02686 304 aaPredicted RBP13.1□□□□□ -0.31
FXN-203ENST00000396366 LINC00869P0C866 280 aa13.1□□□□□ -0.31
FXN-203ENST00000396366 PRB4P10163 310 aaPredicted RBP13.1□□□□□ -0.31
FXN-203ENST00000396366 DLK1P80370 383 aa13.1□□□□□ -0.31
FXN-203ENST00000396366 SPATA31B1PQ5VZV4 182 aa13.1□□□□□ -0.31
FXN-203ENST00000396366 PATE2Q6UY27 113 aa13.1□□□□□ -0.31
FXN-203ENST00000396366 SHANK2-AS3Q9BTD1 123 aa13.1□□□□□ -0.31
FXN-203ENST00000396366 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
FXN-203ENST00000396366 TRAV6A0A075B6T7 132 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 C7orf66A4D0T2 115 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 LYRM1O43325 122 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 HYPMO75409 117 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 OR5G3P0C626 314 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 SLC38A11Q08AI6 406 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 AMTNQ6UX39 209 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 NPVFQ9HCQ7 196 aa13.09□□□□□ -0.31
FXN-203ENST00000396366 SMIM9A6NGZ8 99 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 TCRBP04435 133 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 PRM2P04554 102 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 RAP2BP61225 183 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 SAMD13Q5VXD3 122 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 OR10P1Q8NGE3 313 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 GPR82Q96P67 336 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 SEC22CQ9BRL7 303 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 RNF126Q9BV68 326 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 ARL6Q9H0F7 186 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 RFNGQ9Y644 331 aa13.08□□□□□ -0.32
FXN-203ENST00000396366 TSC22D2O75157 780 aa13.07□□□□□ -0.32
FXN-203ENST00000396366 SPART-AS1P0CW21 52 aa13.07□□□□□ -0.32
FXN-203ENST00000396366 CNN1P51911 297 aaKnown RBP13.07□□□□□ -0.32
FXN-203ENST00000396366 TAS2R30P59541 319 aa13.07□□□□□ -0.32
FXN-203ENST00000396366 PLP1P60201 277 aa13.07□□□□□ -0.32
FXN-203ENST00000396366 SELENOTP62341 195 aa13.07□□□□□ -0.32
FXN-203ENST00000396366 GOLT1BQ9Y3E0 138 aa13.07□□□□□ -0.32
FXN-203ENST00000396366 A8MTW9 85 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 FAM25EA8MYX2 175 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 SNRPCP09234 159 aaKnown RBP13.06□□□□□ -0.32
FXN-203ENST00000396366 CNPY1Q3B7I2 92 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 FAM222AQ5U5X8 452 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 TEPPQ6URK8 271 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 NDUFA13Q9P0J0 144 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 MGAT4CQ9UBM8 478 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 DKK2Q9UBU2 259 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 DNAH2Q9P225 4427 aa13.06□□□□□ -0.32
FXN-203ENST00000396366 TMEM189A5PLL7 270 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 FNDC10F2Z333 226 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 M0R2Z0 102 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 S100A7P31151 101 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 OR11H7Q8NGC8 314 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 NUDT15Q9NV35 164 aa13.05□□□□□ -0.32
FXN-203ENST00000396366 LSM5Q9Y4Y9 91 aaKnown RBP13.05□□□□□ -0.32
FXN-203ENST00000396366 LOC102723971A0A1B0GUV8 181 aa13.04□□□□□ -0.32
FXN-203ENST00000396366 K7EPK0 472 aa13.04□□□□□ -0.32
FXN-203ENST00000396366 AGPAT2O15120 278 aa13.04□□□□□ -0.32
FXN-203ENST00000396366 CRXO43186 299 aaPredicted RBP13.04□□□□□ -0.32
FXN-203ENST00000396366 HBE1P02100 147 aa13.04□□□□□ -0.32
FXN-203ENST00000396366 AMBPP02760 352 aa13.04□□□□□ -0.32
FXN-203ENST00000396366 RPL7P18124 248 aaKnown RBP13.04□□□□□ -0.32
FXN-203ENST00000396366 ZNF738Q8NE65 137 aa13.04□□□□□ -0.32
FXN-203ENST00000396366 ZNF431Q8TF32 576 aaPredicted RBP13.04□□□□□ -0.32
FXN-203ENST00000396366 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
FXN-203ENST00000396366 HECTD4Q9Y4D8 3996 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 L7N2F9 121 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 GOSR2O14653 212 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 MRPS12O15235 138 aaKnown RBP13.03□□□□□ -0.32
FXN-203ENST00000396366 CXCL3P19876 107 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 VAMP2P63027 116 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 ZNF846Q147U1 533 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 MGST2Q99735 147 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 TMEM208Q9BTX3 173 aa13.03□□□□□ -0.32
FXN-203ENST00000396366 YTHDF2Q9Y5A9 579 aaKnown RBP13.03□□□□□ -0.32
FXN-203ENST00000396366 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 A0A087X0K7 114 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 C5orf51A6NDU8 294 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 FAM24AA6NFZ4 105 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.33
FXN-203ENST00000396366 CST7O76096 145 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 DUSP14O95147 198 aaKnown RBP13.02□□□□□ -0.33
FXN-203ENST00000396366 H2AFB2P0C5Z0 115 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 BCAP31P51572 246 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 RRN3P1Q2M238 152 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 MORN5Q5VZ52 161 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 LINC00305Q7Z4B0 112 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms