RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SRD5A2P31213 254 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 HSPE1P61604 102 aaKnown RBP6.93□□□□□ -1.3
NDE1-202ENST00000396355 C8orf46Q8TAG6 207 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 SNRNP40Q96DI7 357 aaKnown RBP6.93□□□□□ -1.3
NDE1-202ENST00000396355 VKORC1Q9BQB6 163 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 IGLV3-12A0A075B6K2 115 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 TRAV2A0A0B4J234 112 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 TRAV12-3A0A0B4J271 114 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 NPIPB13A6NJU9 1138 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 NPIPB4C9JG80 1138 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 MRPL33O75394 65 aaKnown RBP6.93□□□□□ -1.3
NDE1-202ENST00000396355 XGP55808 180 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 LOXL3P58215 753 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 PDPNQ86YL7 162 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 RAX2Q96IS3 184 aa6.93□□□□□ -1.3
NDE1-202ENST00000396355 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
NDE1-202ENST00000396355 CELA2AP08217 269 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 LINC00310P59036 64 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 ERVK11-1P61568 191 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 FOXI1Q12951 378 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 ZC2HC1BQ5TFG8 222 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 NEGR1Q7Z3B1 354 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 C15orf53Q8NAA6 179 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 PPDPFLQ8WWR9 84 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 FAM110AQ9BQ89 295 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 TXNDC17Q9BRA2 123 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 SPANXB1Q9NS25 103 aaPredicted RBP6.92□□□□□ -1.3
NDE1-202ENST00000396355 SSUH2Q9Y2M2 353 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 SORL1Q92673 2214 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 LOC107984640A0A0U1RRK4 108 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 OOEPA6NGQ2 149 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 K7EN84 100 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 C12orf49Q9H741 205 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 OSTCQ9NRP0 149 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 OCIAD1Q9NX40 245 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 MTORP42345 2549 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 TEP1Q99973 2627 aaKnown RBP6.92□□□□□ -1.3
NDE1-202ENST00000396355 ABCA4P78363 2273 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 LINC01549A6NIU2 74 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 MOSP00540 346 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 PSG7Q13046 419 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 ASCL2Q99929 193 aa6.92□□□□□ -1.3
NDE1-202ENST00000396355 USP9YO00507 2555 aaPredicted RBP6.91□□□□□ -1.3
NDE1-202ENST00000396355 F5H768 121 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 MPDU1O75352 247 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 ATP5LO75964 103 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 NMSQ5H8A3 153 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 SCRT2Q9NQ03 307 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 PRRC2CQ9Y520 2896 aaKnown RBP6.91□□□□□ -1.3
NDE1-202ENST00000396355 A0A0U1RQV1 116 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 LIFP15018 202 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 GAGE2AQ6NT46 116 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 H1FXQ92522 213 aaKnown RBP6.91□□□□□ -1.3
NDE1-202ENST00000396355 SMPXQ9UHP9 88 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 V9GYV3 84 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 NCKAP5O14513 1909 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 DKK1O94907 266 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 NTF4P34130 210 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 TWIST1Q15672 202 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 C2orf83Q53S99 150 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 HIST2H2BCQ6DN03 193 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 CNEP1R1Q8N9A8 125 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 COQ2Q96H96 371 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 UCN2Q96RP3 112 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 S1PR3Q99500 378 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 PAXXQ9BUH6 204 aa6.91□□□□□ -1.3
NDE1-202ENST00000396355 LY6G6EA0A0G2JKS1 128 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 LAMA5O15230 3695 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 NGFP01138 241 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 SP1P08047 785 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 ZNF688P0C7X2 276 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 NDUFV3P56181 108 aaKnown RBP6.9□□□□□ -1.3
NDE1-202ENST00000396355 PMVKQ15126 192 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 FREM1Q5H8C1 2179 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 SLC25A53Q5H9E4 307 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 ATP1A1-AS1Q5TC04 95 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 FOXI2Q6ZQN5 318 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 LRRC29Q8WV35 223 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 RND1Q92730 232 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 CHCHD5Q9BSY4 110 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 U3KQA8 63 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 KALRNO60229 2985 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 MLNRO43193 412 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 SUMO3P55854 103 aaPredicted RBP6.9□□□□□ -1.3
NDE1-202ENST00000396355 LYZL4Q96KX0 146 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 ASH1LQ9NR48 2969 aaKnown RBP6.9□□□□□ -1.3
NDE1-202ENST00000396355 ANAPC10Q9UM13 185 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 TIMM9Q9Y5J7 89 aa6.9□□□□□ -1.3
NDE1-202ENST00000396355 NBEAQ8NFP9 2946 aa6.9□□□□□ -1.31
NDE1-202ENST00000396355 NCR2O95944 276 aa6.9□□□□□ -1.31
NDE1-202ENST00000396355 IFI27P40305 119 aaPredicted RBP6.9□□□□□ -1.31
NDE1-202ENST00000396355 LINC00205P59089 165 aa6.9□□□□□ -1.31
NDE1-202ENST00000396355 RPL30P62888 115 aaKnown RBP6.9□□□□□ -1.31
NDE1-202ENST00000396355 CEACAM18A8MTB9 384 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 PYYP10082 97 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 ZNF32P17041 273 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 TNFRSF1AP19438 455 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms