RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
UPK3A-202ENST00000396082 UHRF2Q96PU4 802 aa12.75□□□□□ -0.37
UPK3A-202ENST00000396082 SAV1Q9H4B6 383 aaPredicted RBP12.75□□□□□ -0.37
UPK3A-202ENST00000396082 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
UPK3A-202ENST00000396082 LYRM2Q9NU23 88 aaPredicted RBP12.75□□□□□ -0.37
UPK3A-202ENST00000396082 RNF24Q9Y225 148 aa12.75□□□□□ -0.37
UPK3A-202ENST00000396082 RAB31Q13636 194 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 PXDC1Q5TGL8 231 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 GDF5OSQ5U4N7 250 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 OR4B1Q8NGF8 309 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 C11orf1Q9H5F2 150 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 UQCC1Q9NVA1 299 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
UPK3A-202ENST00000396082 SIX6O95475 246 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 MIFP14174 115 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 CAMLGP49069 296 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 SULT1A1P50225 295 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 HBG1P69891 147 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 HBG2P69892 147 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 IL15RAQ13261 267 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 TMEM252Q8N6L7 170 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 C11orf45Q8TAV5 145 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 MGST2Q99735 147 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 STARD9Q9P2P6 4700 aa12.73□□□□□ -0.37
UPK3A-202ENST00000396082 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 IGSF23A1L1A6 192 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 F6UB75 175 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 COX7A2P2O60397 106 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 RLN2P04090 185 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 S100A11P31949 105 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 FXYD7P58549 80 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 BAXQ07812 192 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 LRRC37A5PQ49AS3 106 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 SPATA31B1PQ5VZV4 182 aa12.72□□□□□ -0.37
UPK3A-202ENST00000396082 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
UPK3A-202ENST00000396082 IGHV4-28A0A0C4DH34 117 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 ZNF705EA8MWA4 302 aaPredicted RBP12.71□□□□□ -0.37
UPK3A-202ENST00000396082 SSNA1O43805 119 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 NANOS2P60321 138 aaKnown RBP12.71□□□□□ -0.37
UPK3A-202ENST00000396082 CEMP1Q6PRD7 247 aaPredicted RBP12.71□□□□□ -0.37
UPK3A-202ENST00000396082 PATE2Q6UY27 113 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 Q6ZRG5 221 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 LINC00305Q7Z4B0 112 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 Q8NAQ8 132 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 CSNK1G2-AS1Q8NCQ2 148 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 C20orf173Q96LM9 149 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 MARVELD1Q9BSK0 173 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 NMES1Q9C002 83 aa12.71□□□□□ -0.37
UPK3A-202ENST00000396082 CYCSP99999 105 aaKnown RBP12.7□□□□□ -0.38
UPK3A-202ENST00000396082 FAM78BQ5VT40 261 aa12.7□□□□□ -0.38
UPK3A-202ENST00000396082 IGFL4Q6B9Z1 124 aa12.7□□□□□ -0.38
UPK3A-202ENST00000396082 PHLDA1Q8WV24 401 aaPredicted RBP12.7□□□□□ -0.38
UPK3A-202ENST00000396082 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
UPK3A-202ENST00000396082 X6R8D5 127 aa12.7□□□□□ -0.38
UPK3A-202ENST00000396082 DYNC2H1Q8NCM8 4307 aaKnown RBP12.7□□□□□ -0.38
UPK3A-202ENST00000396082 TENM2Q9NT68 2774 aa12.69□□□□□ -0.38
UPK3A-202ENST00000396082 A0A0J9YX75 114 aa12.69□□□□□ -0.38
UPK3A-202ENST00000396082 PSG9Q00887 426 aa12.69□□□□□ -0.38
UPK3A-202ENST00000396082 C10orf113Q5VZT2 155 aa12.69□□□□□ -0.38
UPK3A-202ENST00000396082 MIC13Q5XKP0 118 aa12.69□□□□□ -0.38
UPK3A-202ENST00000396082 RNF182Q8N6D2 247 aa12.69□□□□□ -0.38
UPK3A-202ENST00000396082 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
UPK3A-202ENST00000396082 CSMD3Q7Z407 3707 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 IGHV3OR16-12A0A075B7B8 117 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 ELOA3CA0A087WX78 387 aaPredicted RBP12.68□□□□□ -0.38
UPK3A-202ENST00000396082 A0A087X0K7 114 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 E5RGE8 158 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 RBMY1A1P0DJD3 496 aaKnown RBP12.68□□□□□ -0.38
UPK3A-202ENST00000396082 RBMY1CP0DJD4 496 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 FGF7P21781 194 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 RBMY1FQ15415 496 aaKnown RBP12.68□□□□□ -0.38
UPK3A-202ENST00000396082 ATP6V1FQ16864 119 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 ZNF738Q8NE65 137 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 OR1L4Q8NGR5 311 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 CLUHP3Q96NS8 147 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 SLC25A31Q9H0C2 315 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 SLC35B3Q9H1N7 401 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 RYR3Q15413 4870 aa12.68□□□□□ -0.38
UPK3A-202ENST00000396082 TRAV8-2A0A0B4J237 113 aa12.67□□□□□ -0.38
UPK3A-202ENST00000396082 DUSP14O95147 198 aaKnown RBP12.67□□□□□ -0.38
UPK3A-202ENST00000396082 B2MP61769 119 aa12.67□□□□□ -0.38
UPK3A-202ENST00000396082 BPIFA4PQ86YQ2 179 aa12.67□□□□□ -0.38
UPK3A-202ENST00000396082 TMEM37Q8WXS4 190 aa12.67□□□□□ -0.38
UPK3A-202ENST00000396082 PFDN5Q99471 154 aa12.67□□□□□ -0.38
UPK3A-202ENST00000396082 OR5AC2Q9NZP5 309 aa12.67□□□□□ -0.38
UPK3A-202ENST00000396082 OPCMLQ14982 345 aa12.66□□□□□ -0.38
UPK3A-202ENST00000396082 LCN15Q6UWW0 184 aa12.66□□□□□ -0.38
UPK3A-202ENST00000396082 ZNF709Q8N972 641 aa12.66□□□□□ -0.38
UPK3A-202ENST00000396082 OR5C1Q8NGR4 320 aa12.66□□□□□ -0.38
UPK3A-202ENST00000396082 DNAJC4Q9NNZ3 241 aa12.66□□□□□ -0.38
UPK3A-202ENST00000396082 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
UPK3A-202ENST00000396082 GOLT1BQ9Y3E0 138 aa12.66□□□□□ -0.38
UPK3A-202ENST00000396082 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
UPK3A-202ENST00000396082 CNN1P51911 297 aaKnown RBP12.65□□□□□ -0.38
UPK3A-202ENST00000396082 H2BFSP57053 126 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms