RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SUN5Q8TC36 379 aa15.64■□□□□ 0.09
VCPKMT-202ENST00000395860 TSSC4Q9Y5U2 329 aaPredicted RBP15.64■□□□□ 0.09
VCPKMT-202ENST00000395860 CST9LP1Q5W188 147 aa15.63■□□□□ 0.09
VCPKMT-202ENST00000395860 OR8I2Q8N0Y5 310 aa15.63■□□□□ 0.09
VCPKMT-202ENST00000395860 OR11H1Q8NG94 326 aa15.63■□□□□ 0.09
VCPKMT-202ENST00000395860 DPF1Q92782 380 aa15.63■□□□□ 0.09
VCPKMT-202ENST00000395860 SMDT1Q9H4I9 107 aa15.63■□□□□ 0.09
VCPKMT-202ENST00000395860 A0A1W2PRX2 142 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 LINC01619G3V211 115 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 BUB3O43684 328 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 SNRPCP09234 159 aaKnown RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 ZP3P21754 424 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 HOXD3P31249 432 aaPredicted RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 MEF2BQ02080 365 aaPredicted RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 C8orf86Q6ZUL3 223 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 OR4F17Q8NGA8 305 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 OR4F4Q96R69 305 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 IGHV3OR16-13A0A075B7E8 117 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 IGHV3-49A0A0A0MS15 119 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 IGHV3-74A0A0B4J1X5 117 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 APOHP02749 345 aaPredicted RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 RPL7P18124 248 aaKnown RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 OR1N2Q8NGR9 330 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 BLNKQ8WV28 456 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 DAZ1Q9NQZ3 744 aaKnown RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 YTHDF2Q9Y5A9 579 aaKnown RBP15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 U3KQE9 123 aa15.62■□□□□ 0.09
VCPKMT-202ENST00000395860 IGHV3-66A0A0C4DH42 116 aa15.61■□□□□ 0.09
VCPKMT-202ENST00000395860 FAM74A7A6NL05 159 aa15.61■□□□□ 0.09
VCPKMT-202ENST00000395860 C9JQL5 133 aa15.61■□□□□ 0.09
VCPKMT-202ENST00000395860 NBEAP1P0C6P0 100 aa15.61■□□□□ 0.09
VCPKMT-202ENST00000395860 HIST1H1EP10412 219 aaKnown RBP15.61■□□□□ 0.09
VCPKMT-202ENST00000395860 UFC1Q9Y3C8 167 aa15.61■□□□□ 0.09
VCPKMT-202ENST00000395860 ARL2-SNX15V9GYD0 113 aa15.61■□□□□ 0.09
VCPKMT-202ENST00000395860 C11orf94C9JXX5 98 aa15.6■□□□□ 0.09
VCPKMT-202ENST00000395860 K7EMT4 169 aa15.6■□□□□ 0.09
VCPKMT-202ENST00000395860 FOXL1Q12952 345 aa15.6■□□□□ 0.09
VCPKMT-202ENST00000395860 TM4SF20Q53R12 229 aa15.6■□□□□ 0.09
VCPKMT-202ENST00000395860 C1orf194Q5T5A4 169 aa15.6■□□□□ 0.09
VCPKMT-202ENST00000395860 MRPS12O15235 138 aaKnown RBP15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 ATP5G3P48201 142 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 SLURP1P55000 103 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 SYNJ2BPP57105 145 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 REC114Q7Z4M0 266 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 C1QL4Q86Z23 238 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 DUX3Q96PT4 197 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 TXNDC17Q9BRA2 123 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 A0A1W2PRE2 83 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 A0A1W2PS18 150 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 TMEM218A2RU14 115 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 LGALS9O00182 355 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 SRP19P09132 144 aaKnown RBP15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 SFTA3P0C7M3 94 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 IGLC2P0DOY2 106 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 CD81P60033 236 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 GPR82Q96P67 336 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 ZNF586Q9NXT0 402 aa15.59■□□□□ 0.09
VCPKMT-202ENST00000395860 IGHV7-4-1A0A0J9YVY3 117 aa15.58■□□□□ 0.08
VCPKMT-202ENST00000395860 H3BQ15 152 aa15.58■□□□□ 0.08
VCPKMT-202ENST00000395860 H3BTX0 84 aa15.58■□□□□ 0.08
VCPKMT-202ENST00000395860 S100A1P23297 94 aa15.58■□□□□ 0.08
VCPKMT-202ENST00000395860 KLF5Q13887 457 aaPredicted RBP15.58■□□□□ 0.08
VCPKMT-202ENST00000395860 GRAMD2BQ96HH9 432 aa15.58■□□□□ 0.08
VCPKMT-202ENST00000395860 SLC35B3Q9H1N7 401 aa15.58■□□□□ 0.08
VCPKMT-202ENST00000395860 ATF4P18848 351 aaPredicted RBP15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 C16orf54Q6UWD8 224 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 A8MWP6 167 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 KRBOX1C9JBD0 128 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 GALR1P47211 349 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 CEBPGP53567 150 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 KRTAP10-3P60369 221 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 RANP62826 216 aaKnown RBP15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 RAX2Q96IS3 184 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 LINC00052Q96N35 136 aa15.57■□□□□ 0.08
VCPKMT-202ENST00000395860 CYB561D1Q8N8Q1 229 aa15.56■□□□□ 0.08
VCPKMT-202ENST00000395860 C17orf77Q96MU5 243 aa15.56■□□□□ 0.08
VCPKMT-202ENST00000395860 RHPN1-AS1Q9BWJ2 59 aa15.56■□□□□ 0.08
VCPKMT-202ENST00000395860 NKX6-2Q9C056 277 aaPredicted RBP15.56■□□□□ 0.08
VCPKMT-202ENST00000395860 SMPXQ9UHP9 88 aa15.56■□□□□ 0.08
VCPKMT-202ENST00000395860 C2CD3Q4AC94 2353 aa15.56■□□□□ 0.08
VCPKMT-202ENST00000395860 TRBV19A0A075B6N1 114 aa15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 TMEM213A2RRL7 107 aa15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 ZNF785A8K8V0 405 aa15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 F8W036 122 aa15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 PDE6DO43924 150 aa15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 SUMO1P63165 101 aaKnown RBP15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 GLMPQ8WWB7 406 aa15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 SMAD5-AS1Q9Y6J3 95 aa15.55■□□□□ 0.08
VCPKMT-202ENST00000395860 GGTLC3B5MD39 225 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 CCL24O00175 119 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 NDUFS6O75380 124 aaKnown RBP15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 EDN2P20800 178 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 NSUN5P1Q3KNT7 163 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 SIGLEC15Q6ZMC9 328 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 F6UZH7 168 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 CHEK1O14757 476 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 BMI1P35226 326 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 NDUFA11Q86Y39 141 aa15.54■□□□□ 0.08
VCPKMT-202ENST00000395860 ELOVL1Q9BW60 279 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms