RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MANBALQ9NQG1 85 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 TEP1Q99973 2627 aaKnown RBP10.51□□□□□ -0.73
VAPB-202ENST00000395802 ZNF98A6NK75 572 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 LGALS9O00182 355 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 CRYBB3P26998 211 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.51□□□□□ -0.73
VAPB-202ENST00000395802 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
VAPB-202ENST00000395802 PAXXQ9BUH6 204 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 TMEM14CQ9P0S9 112 aa10.51□□□□□ -0.73
VAPB-202ENST00000395802 SETD2Q9BYW2 2564 aaPredicted RBP10.51□□□□□ -0.73
VAPB-202ENST00000395802 IGHV4OR15-8A0A075B7B6 117 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 A0A087WW49 117 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 HOXD3P31249 432 aaPredicted RBP10.5□□□□□ -0.73
VAPB-202ENST00000395802 SRSF2Q01130 221 aaKnown RBP10.5□□□□□ -0.73
VAPB-202ENST00000395802 REC114Q7Z4M0 266 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 OR8I2Q8N0Y5 310 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 OR4F17Q8NGA8 305 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 OR4F4Q96R69 305 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 SLC25A2Q9BXI2 301 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 SLC35B3Q9H1N7 401 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 ARL2-SNX15V9GYD0 113 aa10.5□□□□□ -0.73
VAPB-202ENST00000395802 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
VAPB-202ENST00000395802 GCHFRP30047 84 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 UBE2L3P68036 154 aaKnown RBP10.49□□□□□ -0.73
VAPB-202ENST00000395802 GUCA2BQ16661 112 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 C11orf44Q8N8P7 122 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 RXFP4Q8TDU9 374 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 ELOVL1Q9BW60 279 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 NKX6-2Q9C056 277 aaPredicted RBP10.49□□□□□ -0.73
VAPB-202ENST00000395802 BUB3O43684 328 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 MEOX2P50222 304 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 UNQ9165/PRO28630Q6UXU0 137 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 C8orf86Q6ZUL3 223 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 FAM167A-AS1Q96KT0 104 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 VAX2Q9UIW0 290 aa10.49□□□□□ -0.73
VAPB-202ENST00000395802 TRAV5A0A0B4J249 113 aa10.48□□□□□ -0.73
VAPB-202ENST00000395802 A8MWP6 167 aa10.48□□□□□ -0.73
VAPB-202ENST00000395802 M0QZ24 198 aa10.48□□□□□ -0.73
VAPB-202ENST00000395802 GALR1P47211 349 aa10.48□□□□□ -0.73
VAPB-202ENST00000395802 KLF5Q13887 457 aaPredicted RBP10.48□□□□□ -0.73
VAPB-202ENST00000395802 SVBPQ8N300 66 aa10.48□□□□□ -0.73
VAPB-202ENST00000395802 SUN5Q8TC36 379 aa10.48□□□□□ -0.73
VAPB-202ENST00000395802 IGHV3OR16-8A0A075B7F1 116 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 CCL24O00175 119 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 SCO1O75880 301 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 HIST1H1EP10412 219 aaKnown RBP10.47□□□□□ -0.73
VAPB-202ENST00000395802 MEF2BQ02080 365 aaPredicted RBP10.47□□□□□ -0.73
VAPB-202ENST00000395802 AWAT1Q58HT5 328 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 MORN5Q5VZ52 161 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 CYB561D1Q8N8Q1 229 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 U3KQE9 123 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 IGHV7-4-1A0A0J9YVY3 117 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 A0A1W2PRX2 142 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 SYNJ2BPP57105 145 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 CD81P60033 236 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 FHL3Q13643 280 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 PDE6HQ13956 83 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 DEFB136Q30KP8 78 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 ATRAIDQ6UW56 229 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 ZNF503Q96F45 646 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 ZNF414Q96IQ9 312 aa10.47□□□□□ -0.73
VAPB-202ENST00000395802 A0A1W2PRE2 83 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 HELTA6NFD8 242 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 PAGE4O60829 102 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 NDUFS6O75380 124 aaKnown RBP10.46□□□□□ -0.74
VAPB-202ENST00000395802 OR10J4P0C629 311 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 NBEAP1P0C6P0 100 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 GP9P14770 177 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 ATF4P18848 351 aaPredicted RBP10.46□□□□□ -0.74
VAPB-202ENST00000395802 SOHLH1Q5JUK2 328 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 C18orf65Q6ZTR6 163 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 TMEM158Q8WZ71 300 aa10.46□□□□□ -0.74
VAPB-202ENST00000395802 ZNF207O43670 478 aaKnown RBP10.45□□□□□ -0.74
VAPB-202ENST00000395802 PYYP10082 97 aa10.45□□□□□ -0.74
VAPB-202ENST00000395802 MYCNOSP40205 109 aa10.45□□□□□ -0.74
VAPB-202ENST00000395802 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
VAPB-202ENST00000395802 FXYD5Q96DB9 178 aa10.45□□□□□ -0.74
VAPB-202ENST00000395802 RAX2Q96IS3 184 aa10.45□□□□□ -0.74
VAPB-202ENST00000395802 SMPXQ9UHP9 88 aa10.45□□□□□ -0.74
VAPB-202ENST00000395802 TM4SF20Q53R12 229 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 SAMD13Q5VXD3 122 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 CST9LP1Q5W188 147 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 C16orf54Q6UWD8 224 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 SIGLEC15Q6ZMC9 328 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 LYPD1Q8N2G4 141 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 OR9G4Q8NGQ1 327 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 TCEAL7Q9BRU2 100 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 ZNF785A8K8V0 405 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 PDE6DO43924 150 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 SNAPINO95295 136 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 IGLC2P0DOY2 106 aa10.44□□□□□ -0.74
VAPB-202ENST00000395802 SLURP1P55000 103 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms