RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 A0A1B0GUS0 222 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 PPIFP30405 207 aaKnown RBP14.07□□□□□ -0.16
SIN3A-203ENST00000394949 PLXNA3P51805 1871 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 RNASE2P10153 161 aaKnown RBP14.07□□□□□ -0.16
SIN3A-203ENST00000394949 ZC2HC1BQ5TFG8 222 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 C20orf204Q6ZNR8 217 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 NPFFR1Q9GZQ6 430 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 PLSCR4Q9NRQ2 329 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 IGHV1-46P01743 117 aa14.06□□□□□ -0.16
SIN3A-203ENST00000394949 ADAMTSL5Q6ZMM2 481 aa14.06□□□□□ -0.16
SIN3A-203ENST00000394949 FAM231DQ6ZW35 169 aa14.06□□□□□ -0.16
SIN3A-203ENST00000394949 COA6Q5JTJ3 125 aaKnown RBP14.06□□□□□ -0.16
SIN3A-203ENST00000394949 Q86TA4 180 aa14.06□□□□□ -0.16
SIN3A-203ENST00000394949 CD7P09564 240 aa14.05□□□□□ -0.16
SIN3A-203ENST00000394949 PLEKHB2Q96CS7 222 aa14.05□□□□□ -0.16
SIN3A-203ENST00000394949 THBDP07204 575 aa14.05□□□□□ -0.16
SIN3A-203ENST00000394949 SH2D1AO60880 128 aa14.05□□□□□ -0.16
SIN3A-203ENST00000394949 GHRHP01286 108 aa14.05□□□□□ -0.16
SIN3A-203ENST00000394949 MYOD1P15172 320 aa14.05□□□□□ -0.16
SIN3A-203ENST00000394949 H0YJW9 148 aa14.04□□□□□ -0.16
SIN3A-203ENST00000394949 COLCA1Q6ZS62 124 aa14.04□□□□□ -0.16
SIN3A-203ENST00000394949 C9orf118A6NHY6 69 aa14.04□□□□□ -0.16
SIN3A-203ENST00000394949 SSBP2P81877 361 aaPredicted RBP14.04□□□□□ -0.16
SIN3A-203ENST00000394949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.04□□□□□ -0.166e-7■■■■□ 23.5
SIN3A-203ENST00000394949 DUX3Q96PT4 197 aa14.04□□□□□ -0.16
SIN3A-203ENST00000394949 IGKV2-40A0A087WW87 121 aaPredicted RBP14.04□□□□□ -0.16
SIN3A-203ENST00000394949 M0R2P5 195 aa14.04□□□□□ -0.16
SIN3A-203ENST00000394949 IGKV2D-40P01614 121 aaPredicted RBP14.04□□□□□ -0.16
SIN3A-203ENST00000394949 V9GYV3 84 aa14.04□□□□□ -0.16
SIN3A-203ENST00000394949 IGHV2-26A0A0B4J1V2 119 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 TIMM23O14925 209 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 DUSP14O95147 198 aaKnown RBP14.03□□□□□ -0.16
SIN3A-203ENST00000394949 ZCCHC24Q8N2G6 241 aaKnown RBP14.03□□□□□ -0.16
SIN3A-203ENST00000394949 LRRK1Q38SD2 2015 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 ZNF138P52744 262 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 SLC25A15Q9Y619 301 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 SRSF6Q13247 344 aaKnown RBP14.03□□□□□ -0.16
SIN3A-203ENST00000394949 PI4KAP42356 2102 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 C11orf52Q96A22 123 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
SIN3A-203ENST00000394949 IGKV3OR2-268A0A0C4DH90 116 aa14.02□□□□□ -0.16
SIN3A-203ENST00000394949 B3GALT5-AS1P59052 145 aa14.02□□□□□ -0.16
SIN3A-203ENST00000394949 TMEM158Q8WZ71 300 aa14.02□□□□□ -0.16
SIN3A-203ENST00000394949 PRSS22Q9GZN4 317 aa14.02□□□□□ -0.16
SIN3A-203ENST00000394949 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.02□□□□□ -0.17
SIN3A-203ENST00000394949 PDE6HQ13956 83 aa14.02□□□□□ -0.17
SIN3A-203ENST00000394949 ZNF562Q6V9R5 426 aa14.02□□□□□ -0.17
SIN3A-203ENST00000394949 PGPEP1Q9NXJ5 209 aa14.02□□□□□ -0.17
SIN3A-203ENST00000394949 SPINK8P0C7L1 97 aa14.02□□□□□ -0.17
SIN3A-203ENST00000394949 CD28P10747 220 aa14.02□□□□□ -0.17
SIN3A-203ENST00000394949 VDAC2P45880 294 aaPredicted RBP14.02□□□□□ -0.17
SIN3A-203ENST00000394949 KIR2DL5BA0A0G2JN68 375 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 KIR2DL5BA0A0G2JPC4 375 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 SMIM27A0A1W2PRY6 76 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 TMEM249Q2WGJ8 235 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 KIR2DL5AQ8N109 375 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 DPH3P1Q9H4G8 78 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 PEMTQ9UBM1 199 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 TRGV11A0A075B6L2 103 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 IGHV1-8P0DP01 117 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 SELLP14151 372 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 IGLL1P15814 213 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 MORN3Q6PF18 240 aaPredicted RBP14.01□□□□□ -0.17
SIN3A-203ENST00000394949 AMN1Q8IY45 258 aa14.01□□□□□ -0.17
SIN3A-203ENST00000394949 LMO1P25800 156 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 SRSF8Q9BRL6 282 aaKnown RBP14□□□□□ -0.17
SIN3A-203ENST00000394949 PTPRDP23468 1912 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 MLNRO43193 412 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 IGHV3-11P01762 117 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 COX8AP10176 69 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 PRTN3P24158 256 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 USF3Q68DE3 2245 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 TRAV8-1A0A0A6YYK1 113 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 TMEM200BQ69YZ2 307 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 TMEM14BQ9NUH8 114 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 SIGLEC15Q6ZMC9 328 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 ITLN2Q8WWU7 325 aaPredicted RBP14□□□□□ -0.17
SIN3A-203ENST00000394949 LINC00479Q96M42 142 aa14□□□□□ -0.17
SIN3A-203ENST00000394949 THADAQ6YHU6 1953 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 LYNX1G3V0Z9 82 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 LYNX1P0DP58 116 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 MAJINQ3KP22 176 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 CYYR1Q96J86 154 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 OOSP1A8MZH6 123 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 PYGO2Q9BRQ0 406 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 IGHV1-3A0A0C4DH29 117 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 K7EP13 123 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 K7EP34 96 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 IGKV1-39P01597 117 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 IGKV1D-39P04432 117 aa13.99□□□□□ -0.17
SIN3A-203ENST00000394949 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
SIN3A-203ENST00000394949 IGKV1D-17A0A075B6S4 117 aa13.98□□□□□ -0.17
SIN3A-203ENST00000394949 TRAV12-3A0A0B4J271 114 aa13.98□□□□□ -0.17
SIN3A-203ENST00000394949 ARMS2P0C7Q2 107 aa13.98□□□□□ -0.17
SIN3A-203ENST00000394949 ZNF672Q499Z4 452 aaPredicted RBP13.98□□□□□ -0.17
SIN3A-203ENST00000394949 TOMM7Q9P0U1 55 aa13.98□□□□□ -0.17
SIN3A-203ENST00000394949 VCYO14598 125 aa13.98□□□□□ -0.17
SIN3A-203ENST00000394949 C9orf139Q6ZV77 190 aa13.98□□□□□ -0.17
SIN3A-203ENST00000394949 TMEM75Q8N9X5 138 aa13.98□□□□□ -0.17
SIN3A-203ENST00000394949 PAX8Q06710 450 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms