RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 RPL15P61313 204 aaKnown RBP12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 SLC50A1Q9BRV3 221 aa12.75□□□□□ -0.37
SPOCK1-202ENST00000394945 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 C9JAW5 83 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 TOMM40O96008 361 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 Q6P435 159 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 C1orf162Q8NEQ5 155 aaPredicted RBP12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 IGHV3-64A0A075B6Q5 118 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 SLC25A39Q9BZJ4 359 aaPredicted RBP12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 IGKV2-40A0A087WW87 121 aaPredicted RBP12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 M0R2P5 195 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 TNFRSF6BO95407 300 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 IGKV2D-40P01614 121 aaPredicted RBP12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 ZNF329Q86UD4 541 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 PLSCR4Q9NRQ2 329 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 KLF12Q9Y4X4 402 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 PRSS57Q6UWY2 283 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 CSTL1Q9H114 145 aa12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 RPUSD1Q9UJJ7 312 aaKnown RBP12.74□□□□□ -0.37
SPOCK1-202ENST00000394945 IGHV1-24A0A0C4DH33 117 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 CD24P25063 80 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 VWC2Q2TAL6 325 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 GFRA4Q9GZZ7 299 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 YAE1D1Q9NRH1 226 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 CNTFRP26992 372 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 ATP1A1-AS1Q5TC04 95 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 SPANXA1Q9NS26 97 aa12.73□□□□□ -0.37
SPOCK1-202ENST00000394945 TRAV40A0A0B4J280 105 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 NUPR1O60356 82 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 VDAC2P45880 294 aaPredicted RBP12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 SNRPD3P62318 126 aaKnown RBP12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 SLC25A15Q9Y619 301 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 TMPRSS3P57727 454 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 DEFB125Q8N687 156 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 TOMM7Q9P0U1 55 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 LOC102723996A0A087X1L8 192 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 RAX2Q96IS3 184 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 TRGV9Q99603 122 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 IGKV1-39P01597 117 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 IGKV1D-39P04432 117 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 PDLIM4P50479 330 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 ZNF562Q6V9R5 426 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
SPOCK1-202ENST00000394945 LINC01549A6NIU2 74 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 SRRM5B3KS81 715 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 TRGV3P03979 118 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 PRR7Q8TB68 274 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 PPDPFLQ8WWR9 84 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 TRAV21A0A0B4J279 112 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 A0A0U1RRA0 63 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 FNDC10F2Z333 226 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 EFEMP2O95967 443 aa12.71□□□□□ -0.37
SPOCK1-202ENST00000394945 MLNRO43193 412 aa12.71□□□□□ -0.38
SPOCK1-202ENST00000394945 SH2D1AO60880 128 aa12.71□□□□□ -0.38
SPOCK1-202ENST00000394945 PAX1P15863 534 aa12.71□□□□□ -0.38
SPOCK1-202ENST00000394945 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.38
SPOCK1-202ENST00000394945 TMEM190Q8WZ59 177 aa12.71□□□□□ -0.38
SPOCK1-202ENST00000394945 RHOGP84095 191 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 H3BMG7 143 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 CFHR2P36980 270 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 Q86TA4 180 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 GGNQ86UU5 652 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 GGTLC3B5MD39 225 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 NBR2O15453 112 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 RNASE2P10153 161 aaKnown RBP12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 FAM27E3Q08E93 113 aa12.7□□□□□ -0.38
SPOCK1-202ENST00000394945 SMIM27A0A1W2PRY6 76 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 IL18BPO95998 194 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 CD7P09564 240 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 EDA2RQ9HAV5 297 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 Q8TAT8 98 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 GLMPQ8WWB7 406 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 TMEM8BA6NDV4 472 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 CT83Q5H943 113 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 SAP30O75446 220 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 VGLL1Q99990 258 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 TMEM133Q9H2Q1 129 aa12.69□□□□□ -0.38
SPOCK1-202ENST00000394945 TMEM167AQ8TBQ9 72 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 NPFFR1Q9GZQ6 430 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 C11orf52Q96A22 123 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 MBNL3Q9NUK0 354 aaKnown RBP12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 ZNF492Q9P255 531 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 LGALS9BQ3B8N2 356 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 LGALS9CQ6DKI2 356 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 AMTNQ6UX39 209 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 WFDC12Q8WWY7 111 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 C17orf100A8MU93 164 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 SP9P0CG40 484 aa12.68□□□□□ -0.38
SPOCK1-202ENST00000394945 C9orf153Q5TBE3 101 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms