RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZNF492Q9P255 531 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 LAMA5O15230 3695 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 M0QZ24 198 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 CCL21O00585 134 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 NBR2O15453 112 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 WT1P19544 449 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 LINC01560Q8TB33 94 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 MAP1LC3AQ9H492 121 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 IGF2RP11717 2491 aa9.4□□□□□ -0.9
UBE2D3-209ENST00000394804 LYNX1G3V0Z9 82 aa9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 LYNX1P0DP58 116 aa9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 CEACAM8P31997 349 aaPredicted RBP9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 TMEM155Q4W5P6 130 aa9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 Q86TA4 180 aa9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 C21orf62Q9NYP8 219 aa9.4□□□□□ -0.91
UBE2D3-209ENST00000394804 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 A0A1B0GWJ7 208 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 GAGE10A6NGK3 116 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 NPSP0C0P6 89 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 CGB3P0DN86 165 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 CGB7P0DN87 165 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 ASPHD1Q5U4P2 390 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 ORMDL3Q8N138 153 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 LOC105371242A0A075B767 164 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 TIMM23O14925 209 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 SSBP2P81877 361 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 GAGE1Q13065 139 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 FBLN7Q53RD9 439 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 GFRA4Q9GZZ7 299 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 AKAP13Q12802 2813 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 Q8N7P7 452 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 TPSG1Q9NRR2 321 aa9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 PEF1Q9UBV8 284 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-209ENST00000394804 DIAPH2-AS1Q14236 149 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 MORN5Q5VZ52 161 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 ORAOV1Q8WV07 137 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 ZNF414Q96IQ9 312 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 OR2T8A6NH00 312 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 LOXP28300 417 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 LOC102724200A0A096LPH7 203 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 hDV102S1A0JD36 115 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 OR2J3O76001 311 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 MS4A6AQ9H2W1 248 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 IGHV3-35A0A0C4DH35 117 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 SNAI2O43623 268 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 ARPC1AQ92747 370 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 RNF5Q99942 180 aa9.38□□□□□ -0.91
UBE2D3-209ENST00000394804 MUC21A0A0G2JKD1 596 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 MUC21A0A140T8X8 626 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 BUB1B-PAK6H3BSN5 160 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 GPR183P32249 361 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 MUC21Q5SSG8 566 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 SEM1Q6ZVN7 128 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 MED13LQ71F56 2210 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 UTF1Q5T230 341 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 TMEM78Q5T7P6 136 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 ERASQ7Z444 233 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 FAM106CPP0CH98 169 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 RAB9AP51151 201 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 HIST1H1AQ02539 215 aaPredicted RBP9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 FER1L6-AS1Q8NA97 138 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 ZNF503Q96F45 646 aa9.37□□□□□ -0.91
UBE2D3-209ENST00000394804 A1L4Q6 167 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 FBLL1A6NHQ2 334 aaKnown RBP9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 ZNF138P52744 262 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 J3QR89 54 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 IGLL1P15814 213 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 MPV17L2Q567V2 206 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 C1orf229Q6ZS94 237 aaPredicted RBP9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 MYOZ3Q8TDC0 251 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 CD24P25063 80 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 CNTFRP26992 372 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
UBE2D3-209ENST00000394804 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 UBE2V1Q13404 147 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 KLF5Q13887 457 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 STPG4Q8N801 248 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 COX11Q9Y6N1 276 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 AKAP6Q13023 2319 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 DMXL2Q8TDJ6 3036 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 ARFGEF3Q5TH69 2177 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 IGLC7A0M8Q6 106 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 C8orf31Q8N9H6 132 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 SHANK2-AS3Q9BTD1 123 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 CFAP47Q6ZTR5 3102 aa9.35□□□□□ -0.91
UBE2D3-209ENST00000394804 E7EQL1 145 aa9.34□□□□□ -0.91
UBE2D3-209ENST00000394804 HBDP02042 147 aa9.34□□□□□ -0.91
UBE2D3-209ENST00000394804 DLX6P56179 175 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms