RNA–Protein interactions for RNA: ENST00000390533.1

TRAJ4-201, Transcript of T cell receptor alpha joining 4, humanhuman

APPRIS P1 BASIC

Gene TRAJ4, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ4-201ENST00000390533 SNAI2O43623 268 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 TIMM8AO60220 97 aaPredicted RBP3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 LHBP01229 141 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 IGLV1-44P01699 117 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 MYOD1P15172 320 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 SPINK2P20155 84 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 GCSHP23434 173 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 ACP1P24666 158 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 CD24P25063 80 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 FCER1GP30273 86 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 GATA4P43694 442 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 ODF1Q14990 250 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 MLANAQ16655 118 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 C12orf74Q32Q52 190 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 KLF17Q5JT82 389 aaPredicted RBP3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 LYRM7Q5U5X0 104 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 ZNF562Q6V9R5 426 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 LINC00696Q6ZRV3 163 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 C8orf31Q8N9H6 132 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 TMEM158Q8WZ71 300 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 NAA38Q9BRA0 125 aaKnown RBP3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 C1QTNF4Q9BXJ3 329 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 TTTY12Q9BZ98 90 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 NXT2Q9NPJ8 142 aaKnown RBP3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 ZNF71Q9NQZ8 489 aaPredicted RBP3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 DKK4Q9UBT3 224 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 RPUSD1Q9UJJ7 312 aaKnown RBP3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 ERG28Q9UKR5 140 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 HHLA3Q9XRX5 114 aa3.96□□□□□ -1.78
TRAJ4-201ENST00000390533 PLXNB1O43157 2135 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 D6R8Y8 96 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 SLC25A17O43808 307 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 DPM2O94777 84 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 IGKCP01834 107 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 IGHG4P01861 327 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 IGHV1-2P23083 117 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 MAGEA5P43359 124 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 NMUP48645 174 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 TCTAP57738 103 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 SSBP2P81877 361 aaPredicted RBP3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 FOXI1Q12951 378 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 PDE6HQ13956 83 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 TWIST1Q15672 202 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 ETDBQ3ZM63 59 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 MRPL51Q4U2R6 128 aaKnown RBP3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 Q5PR19 223 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 Q6ZT83 130 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 CXorf67Q86X51 503 aaPredicted RBP3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 LINC00311Q8N616 119 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 OR4C13Q8NGP0 309 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 SRSF12Q8WXF0 261 aaKnown RBP3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 C18orf15Q96N68 181 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 SCNM1Q9BWG6 230 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 CNFNQ9BYD5 112 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 TMEM133Q9H2Q1 129 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 CDIP1Q9H305 208 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 MAP1LC3AQ9H492 121 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 PGPEP1Q9NXJ5 209 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 PSG8Q9UQ74 426 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 HIGD1AQ9Y241 93 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 SVILO95425 2214 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 MED13Q9UHV7 2174 aa3.95□□□□□ -1.78
TRAJ4-201ENST00000390533 CADP27708 2225 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 TRBV7-3A0A075B6L6 115 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 TRBV19A0A075B6N1 114 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 SPAARA0A1B0GVQ0 90 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 CGB1A6NKQ9 187 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 CEACAM4O75871 244 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 IGKV1-16P04430 117 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 CELA3AP09093 270 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 FAM106CPP0CH98 169 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 WT1-ASQ06250 92 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 LOXL1Q08397 574 aaPredicted RBP3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 PLGLAQ15195 96 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 C3AR1Q16581 482 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 C3orf36Q3SXR2 165 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 VMA21Q3ZAQ7 101 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 FAM106AQ4KMX7 169 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 ASPHD1Q5U4P2 390 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 CFAP126Q5VTH2 177 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 SPINK14Q6IE38 97 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 Q6ZUT4 128 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 GOLT1AQ6ZVE7 132 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 SH2D6Q7Z4S9 175 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 S100A7AQ86SG5 101 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 PRNTQ86SH4 94 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 SBSPONQ8IVN8 264 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 PPDPFLQ8WWR9 84 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 FLYWCH2Q96CP2 140 aaKnown RBP3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 HARBI1Q96MB7 349 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 SRSF8Q9BRL6 282 aaKnown RBP3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 NHP2Q9NX24 153 aaKnown RBP3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 DKK2Q9UBU2 259 aa3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 F11RQ9Y624 299 aaKnown RBP3.94□□□□□ -1.78
TRAJ4-201ENST00000390533 URB1O60287 2271 aaKnown RBP3.93□□□□□ -1.78
TRAJ4-201ENST00000390533 TRBV20-1A0A075B6N2 111 aa3.93□□□□□ -1.78
TRAJ4-201ENST00000390533 IGKV2D-26A0A0A0MRZ7 120 aa3.93□□□□□ -1.78
TRAJ4-201ENST00000390533 TRAV12-1A0A0B4J245 112 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms