RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 IGHV7-4-1A0A0J9YVY3 117 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 TMEM218A2RU14 115 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 HELTA6NFD8 242 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 FAM74A7A6NL05 159 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 A8MWP6 167 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 C11orf94C9JXX5 98 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 TMEM250H0YL14 139 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 M0QZ24 198 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 ZNF253O75346 499 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 ATP6V1G1O75348 118 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 OR10J4P0C629 311 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 GP9P14770 177 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 ATF4P18848 351 aaPredicted RBP6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 HOXD3P31249 432 aaPredicted RBP6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 PSG9Q00887 426 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 KLF5Q13887 457 aaPredicted RBP6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 ICAM4Q14773 271 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 SAMD13Q5VXD3 122 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 LEMD1Q68G75 181 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 UNQ9165/PRO28630Q6UXU0 137 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 NDUFA11Q86Y39 141 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 OR11H1Q8NG94 326 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 RXFP4Q8TDU9 374 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 RPUSD4Q96CM3 377 aaKnown RBP6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 FXYD5Q96DB9 178 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 ZNF414Q96IQ9 312 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 RARRES2Q99969 163 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 CLEC5AQ9NY25 188 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
RNU1-28P-201ENST00000383861 OTOGQ6ZRI0 2925 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 BAHCC1Q9P281 2608 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 TRBV19A0A075B6N1 114 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 A0A087X0K7 114 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 ZNF785A8K8V0 405 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 EIF3GO75821 320 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 IGLC2P0DOY2 106 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 PYYP10082 97 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 MYCNOSP40205 109 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 UBE2G2P60604 165 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 FAM74A3Q4VXF1 159 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 ARL6IP6Q8N6S5 226 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 CITED2Q99967 270 aaPredicted RBP6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 AAMDCQ9H7C9 122 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 OTORQ9NRC9 128 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 CSMD1Q96PZ7 3565 aa6.77□□□□□ -1.33
RNU1-28P-201ENST00000383861 IGHV3OR16-8A0A075B7F1 116 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 CCL24O00175 119 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 MRPS12O15235 138 aaKnown RBP6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 ZNF207O43670 478 aaKnown RBP6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SRP19P09132 144 aaKnown RBP6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SFTA3P0C7M3 94 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SYNJ2BPP57105 145 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 CD81P60033 236 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SRSF3P84103 164 aaKnown RBP6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SOHLH1Q5JUK2 328 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SIGLEC15Q6ZMC9 328 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 BLNKQ8WV28 456 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 GLMPQ8WWB7 406 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 HIST1H2BAQ96A08 127 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SLC50A1Q9BRV3 221 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 RHPN1-AS1Q9BWJ2 59 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 SEC11CQ9BY50 192 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 ZNF586Q9NXT0 402 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 PRELID1Q9Y255 219 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 ZANQ9Y493 2812 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 ACANP16112 2415 aa6.76□□□□□ -1.33
RNU1-28P-201ENST00000383861 AKAP9Q99996 3911 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 SERTM2A0A1B0GWG4 89 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 PGPA6NDG6 321 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 F8W036 122 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 H3BQ15 152 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 CHEK1O14757 476 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 S100A9P06702 114 aaKnown RBP6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 CSN1S1P47710 185 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 RANP62826 216 aaKnown RBP6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 SUMO1P63165 101 aaKnown RBP6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 FHL3Q13643 280 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 TM4SF20Q53R12 229 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 CCDC28AQ8IWP9 274 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 C5orf17Q8NAS9 161 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 OR9G4Q8NGQ1 327 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 CMTM2Q8TAZ6 248 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 C11orf52Q96A22 123 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 RAX2Q96IS3 184 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 Q9H3A6 140 aa6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 YTHDF2Q9Y5A9 579 aaKnown RBP6.75□□□□□ -1.33
RNU1-28P-201ENST00000383861 MAP1AP78559 2803 aaPredicted RBP6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 A0A1W2PRX2 142 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 TMEM213A2RRL7 107 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 C2orf70A6NJV1 201 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 K7EQM0 130 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 APOHP02749 345 aaPredicted RBP6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 SLC25A5P05141 298 aaKnown RBP6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 CBLN1P23435 193 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 ATP5G3P48201 142 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 SLURP1P55000 103 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms