RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 A0A096LNJ9 63 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 TRAV8-1A0A0A6YYK1 113 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 CIARTQ8N365 385 aaPredicted RBP12.11□□□□□ -0.47
VLDLR-202ENST00000382099 Q8TCH9 128 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 PTPRZ1P23471 2315 aaPredicted RBP12.11□□□□□ -0.47
VLDLR-202ENST00000382099 LINC01548A6NM66 108 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 FAM90A9PA6NNJ1 464 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 J3QT63 122 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 SPINT2O43291 252 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 IL4P05112 153 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 RIGQ13278 110 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 PPDPFLQ8WWR9 84 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 PROK2Q9HC23 129 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 TMEM160Q9NX00 188 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 EXPH5Q8NEV8 1989 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 POLEQ07864 2286 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 EVI2AP22794 236 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
VLDLR-202ENST00000382099 CCL7P80098 99 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 MEIG1Q5JSS6 88 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
VLDLR-202ENST00000382099 VPREB3Q9UKI3 123 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 LILRA5A6NI73 299 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 SRYQ05066 204 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 C10orf113Q5VZT2 155 aa12.1□□□□□ -0.47
VLDLR-202ENST00000382099 A0A1W2PQM1 296 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 PRNTQ86SH4 94 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 WDR31Q8NA23 367 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 NDUFS7O75251 213 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 FKBP2P26885 142 aaKnown RBP12.09□□□□□ -0.47
VLDLR-202ENST00000382099 SMCPP49901 116 aaPredicted RBP12.09□□□□□ -0.47
VLDLR-202ENST00000382099 FAM167A-AS1Q96KT0 104 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 ZNF576Q9H609 170 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 IGHV1OR15-9A0A0B4J2B8 117 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 IFITM1P13164 125 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 ORM2P19652 201 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 ZNF766Q5HY98 468 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 RBMXL3Q8N7X1 1067 aaKnown RBP12.09□□□□□ -0.47
VLDLR-202ENST00000382099 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 HIGD1BQ9P298 99 aa12.09□□□□□ -0.47
VLDLR-202ENST00000382099 TRAV8-2A0A0B4J237 113 aa12.08□□□□□ -0.48
VLDLR-202ENST00000382099 SMKR1H3BMG3 65 aa12.08□□□□□ -0.48
VLDLR-202ENST00000382099 HSPE1P61604 102 aaKnown RBP12.08□□□□□ -0.48
VLDLR-202ENST00000382099 EIF4EBP1Q13541 118 aaPredicted RBP12.08□□□□□ -0.48
VLDLR-202ENST00000382099 MOGAT3Q86VF5 341 aa12.08□□□□□ -0.48
VLDLR-202ENST00000382099 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
VLDLR-202ENST00000382099 RAB1BQ9H0U4 201 aa12.08□□□□□ -0.48
VLDLR-202ENST00000382099 MAP1LC3AQ9H492 121 aa12.08□□□□□ -0.48
VLDLR-202ENST00000382099 ZNF688P0C7X2 276 aa12.08□□□□□ -0.48
VLDLR-202ENST00000382099 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 AJUBAQ96IF1 538 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 FOXC2Q99958 501 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 FBXL15Q9H469 300 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 MGAQ8IWI9 3026 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 TET2Q6N021 2002 aaPredicted RBP12.07□□□□□ -0.48
VLDLR-202ENST00000382099 HAX1O00165 279 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 WNT9BO14905 357 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 HOXA3O43365 443 aaPredicted RBP12.07□□□□□ -0.48
VLDLR-202ENST00000382099 SSR4P51571 173 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 CARD19Q96LW7 228 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 KLF17Q5JT82 389 aaPredicted RBP12.07□□□□□ -0.48
VLDLR-202ENST00000382099 NFAM1Q8NET5 270 aaPredicted RBP12.07□□□□□ -0.48
VLDLR-202ENST00000382099 OR13A1Q8NGR1 328 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 PLCE1Q9P212 2302 aa12.07□□□□□ -0.48
VLDLR-202ENST00000382099 PLGLB1Q02325 96 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 KRTAP27-1Q3LI81 207 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 C17orf82Q86X59 251 aaPredicted RBP12.06□□□□□ -0.48
VLDLR-202ENST00000382099 AMN1Q8IY45 258 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
VLDLR-202ENST00000382099 NBASA2RRP1 2371 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 CACNA1HO95180 2353 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 IGKCP01834 107 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 ATP6V0E2Q8NHE4 81 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 RAB9BQ9NP90 201 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 DMXL2Q8TDJ6 3036 aa12.06□□□□□ -0.48
VLDLR-202ENST00000382099 A0A087WX48 190 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 IGLV3-19P01714 112 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 ZFP2Q6ZN57 461 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 ZNF826PQ6ZT77 177 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 SMRP1Q8NCR6 262 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 RTL8AQ9BWD3 113 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 PRSS22Q9GZN4 317 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 BDP1A6H8Y1 2624 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 EML6Q6ZMW3 1958 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 IGLV3-32A0A0A0MS00 114 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 C15orf61A6NNL5 157 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 CCL3P10147 92 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 SLC25A45Q8N413 288 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 LEAP2Q969E1 77 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 COQ2Q96H96 371 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 TPRP12270 2363 aaKnown RBP12.05□□□□□ -0.48
VLDLR-202ENST00000382099 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
VLDLR-202ENST00000382099 MRPL33O75394 65 aaKnown RBP12.05□□□□□ -0.48
VLDLR-202ENST00000382099 FOXG1P55316 489 aaPredicted RBP12.05□□□□□ -0.48
VLDLR-202ENST00000382099 LINC00305Q7Z4B0 112 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms