RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NRN1Q9NPD7 142 aa12.02□□□□□ -0.49
SNRPB-201ENST00000381342 DNAH9Q9NYC9 4486 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 IFNA5P01569 189 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 ZNF688P0C7X2 276 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 S100A7P31151 101 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 AP2S1P53680 142 aaPredicted RBP12.01□□□□□ -0.49
SNRPB-201ENST00000381342 ZNF124Q15973 351 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 MORN5Q5VZ52 161 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 C10orf113Q5VZT2 155 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 Q6ZRG5 221 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 LINC00305Q7Z4B0 112 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 APRG1Q8IVJ8 170 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 INO80EQ8NBZ0 244 aaPredicted RBP12.01□□□□□ -0.49
SNRPB-201ENST00000381342 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
SNRPB-201ENST00000381342 COL7A1Q02388 2944 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 BOLA2-SMG1P6H3BVE0 249 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 GALR1P47211 349 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 GCSAMLQ5JQS6 135 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 ZNF709Q8N972 641 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 HYLS1Q96M11 299 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 FAM110AQ9BQ89 295 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 KCNIP2Q9NS61 270 aa12□□□□□ -0.49
SNRPB-201ENST00000381342 ELOA3CA0A087WX78 387 aaPredicted RBP11.99□□□□□ -0.49
SNRPB-201ENST00000381342 RBMY1BA6NDE4 496 aaKnown RBP11.99□□□□□ -0.49
SNRPB-201ENST00000381342 RBMY1EA6NEQ0 496 aaKnown RBP11.99□□□□□ -0.49
SNRPB-201ENST00000381342 C17orf112F2Z3M2 114 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 ARPC5O15511 151 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 RBMY1DP0C7P1 496 aaKnown RBP11.99□□□□□ -0.49
SNRPB-201ENST00000381342 DEFB131AP59861 70 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 S100A7AQ86SG5 101 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 GPR82Q96P67 336 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 PFDN5Q99471 154 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 PARD6GQ9BYG4 376 aaPredicted RBP11.99□□□□□ -0.49
SNRPB-201ENST00000381342 DNAJC4Q9NNZ3 241 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 RFNGQ9Y644 331 aa11.99□□□□□ -0.49
SNRPB-201ENST00000381342 HMSDA8MTL9 139 aa11.98□□□□□ -0.49
SNRPB-201ENST00000381342 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
SNRPB-201ENST00000381342 C17orf77Q96MU5 243 aa11.98□□□□□ -0.49
SNRPB-201ENST00000381342 SPATA25Q9BR10 227 aa11.98□□□□□ -0.49
SNRPB-201ENST00000381342 C3orf84H3BNL1 204 aa11.97□□□□□ -0.49
SNRPB-201ENST00000381342 SOCS3O14543 225 aa11.97□□□□□ -0.49
SNRPB-201ENST00000381342 RPL7P18124 248 aaKnown RBP11.97□□□□□ -0.49
SNRPB-201ENST00000381342 ATF4P18848 351 aaPredicted RBP11.97□□□□□ -0.49
SNRPB-201ENST00000381342 ZNF266Q14584 549 aa11.97□□□□□ -0.49
SNRPB-201ENST00000381342 PSMG4Q5JS54 123 aa11.97□□□□□ -0.49
SNRPB-201ENST00000381342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.97□□□□□ -0.49
SNRPB-201ENST00000381342 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
SNRPB-201ENST00000381342 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.49
SNRPB-201ENST00000381342 SNRPD3P62318 126 aaKnown RBP11.96□□□□□ -0.49
SNRPB-201ENST00000381342 FFAR4Q5NUL3 377 aa11.96□□□□□ -0.49
SNRPB-201ENST00000381342 LINC00322Q6ZN03 302 aaPredicted RBP11.96□□□□□ -0.49
SNRPB-201ENST00000381342 HSD17B11Q8NBQ5 300 aa11.96□□□□□ -0.49
SNRPB-201ENST00000381342 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.49
SNRPB-201ENST00000381342 TM2D3Q9BRN9 247 aa11.96□□□□□ -0.49
SNRPB-201ENST00000381342 MFFQ9GZY8 342 aa11.96□□□□□ -0.49
SNRPB-201ENST00000381342 MRPS12O15235 138 aaKnown RBP11.95□□□□□ -0.5
SNRPB-201ENST00000381342 PSMB3P49720 205 aa11.95□□□□□ -0.5
SNRPB-201ENST00000381342 MEOX2P50222 304 aa11.95□□□□□ -0.5
SNRPB-201ENST00000381342 HAGHQ16775 308 aa11.95□□□□□ -0.5
SNRPB-201ENST00000381342 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
SNRPB-201ENST00000381342 RPL7L1Q6DKI1 246 aaKnown RBP11.95□□□□□ -0.5
SNRPB-201ENST00000381342 RNF24Q9Y225 148 aa11.95□□□□□ -0.5
SNRPB-201ENST00000381342 A0A087X0K7 114 aa11.94□□□□□ -0.5
SNRPB-201ENST00000381342 LOC102724200A0A096LPH7 203 aaPredicted RBP11.94□□□□□ -0.5
SNRPB-201ENST00000381342 KNCNA6PVL3 124 aa11.94□□□□□ -0.5
SNRPB-201ENST00000381342 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
SNRPB-201ENST00000381342 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
SNRPB-201ENST00000381342 ZNF345Q14585 488 aa11.94□□□□□ -0.5
SNRPB-201ENST00000381342 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
SNRPB-201ENST00000381342 BPIFA4PQ86YQ2 179 aa11.94□□□□□ -0.5
SNRPB-201ENST00000381342 C16orf92Q96LL3 132 aa11.94□□□□□ -0.5
SNRPB-201ENST00000381342 AGRNO00468 2067 aa11.94□□□□□ -0.5
SNRPB-201ENST00000381342 H3BTX0 84 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 ISLRO14498 428 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 ATP6V0CP27449 155 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 ID1P41134 155 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 DEFB1P60022 68 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 IGFL4Q6B9Z1 124 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 MIR17HGQ75NE6 70 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 C9orf62Q8N4C0 152 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 MUC7Q8TAX7 377 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 C20orf173Q96LM9 149 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 LINC00052Q96N35 136 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 SH3BGRL3Q9H299 93 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
SNRPB-201ENST00000381342 TIMM9Q9Y5J7 89 aa11.93□□□□□ -0.5
SNRPB-201ENST00000381342 BORCS7-ASMTA0A0B4J1R7 106 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 IGLC2P0DOY2 106 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
SNRPB-201ENST00000381342 ACTL10Q5JWF8 245 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 SAMD13Q5VXD3 122 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 KCNRGQ8N5I3 272 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 RNF182Q8N6D2 247 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 SLC25A2Q9BXI2 301 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 MRPL32Q9BYC8 188 aaKnown RBP11.92□□□□□ -0.5
SNRPB-201ENST00000381342 RETNQ9HD89 108 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
SNRPB-201ENST00000381342 HUWE1Q7Z6Z7 4374 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms