RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 FAM103A1Q9BTL3 118 aaKnown RBP8.25□□□□□ -1.09
POLR2J3-201ENST00000379340 IGHV7-81A0A0B4J1V7 117 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 IFITM10A6NMD0 228 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 SLC17A3O00476 420 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 ZNF491Q8N8L2 437 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 OR4F17Q8NGA8 305 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 VN1R17PQ8TDU5 208 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 C10orf105Q8TEF2 133 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 BLNKQ8WV28 456 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 GPR61Q9BZJ8 451 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 Q9H3A6 140 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 C21orf62Q9NYP8 219 aa8.24□□□□□ -1.09
POLR2J3-201ENST00000379340 NBEAL1Q6ZS30 2694 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 TRBV6-1A0A0K0K1D8 114 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 SMIM27A0A1W2PRY6 76 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 VWC2LB2RUY7 222 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 NDPQ00604 133 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 FBLN7Q53RD9 439 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 CLEC2AQ6UVW9 174 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 PRIMA1Q86XR5 153 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 GPR82Q96P67 336 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 GNB1LQ9BYB4 327 aa8.23□□□□□ -1.09
POLR2J3-201ENST00000379340 CENPVL3A0A0U1RRI6 287 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 ZNF705GA8MUZ8 300 aaPredicted RBP8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 GATCO43716 136 aaKnown RBP8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 TCRAP04437 139 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 IL4P05112 153 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 DSCR9P59020 149 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 Q56UQ5 140 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 RASL11AQ6T310 242 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 OR10D4PQ8NGN7 298 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 GRAMD2BQ96HH9 432 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 FOXC2Q99958 501 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 RNASE7Q9H1E1 156 aaKnown RBP8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 NIT2Q9NQR4 276 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 IZUMO1RA6ND01 250 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 EGR2P11161 476 aaPredicted RBP8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 FABP4P15090 132 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 PDE6HQ13956 83 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 KLF17Q5JT82 389 aaPredicted RBP8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 FAM120AOSQ5T036 256 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 OR8I2Q8N0Y5 310 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 CMTM2Q8TAZ6 248 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 MBD6Q96DN6 1003 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 SERTAD4Q9NUC0 356 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 ZNF586Q9NXT0 402 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 ZNF492Q9P255 531 aa8.22□□□□□ -1.09
POLR2J3-201ENST00000379340 ATRQ13535 2644 aa8.21□□□□□ -1.09
POLR2J3-201ENST00000379340 HRNRQ86YZ3 2850 aaPredicted RBP8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 TRBV19A0A075B6N1 114 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 IGHV1-69DA0A0B4J2H0 117 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 PCP4L1A6NKN8 68 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 F8W735 103 aaPredicted RBP8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 K7EQM0 130 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 NDUFB8O95169 186 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 LTAP01374 205 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 IGHV1-69P01742 117 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 IGLC2P0DOY2 106 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 PAX1P15863 534 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 ADMP35318 185 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 ATP5J2P56134 94 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 GNG5P63218 68 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 CT83Q5H943 113 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 LEMD1Q68G75 181 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 UNQ5815/PRO19632Q6UWF5 114 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 ARL6IP6Q8N6S5 226 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 TMEM18Q96B42 140 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 LINC00479Q96M42 142 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 PACRGQ96M98 296 aaPredicted RBP8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 HIST1H2BLQ99880 126 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 MLST8Q9BVC4 326 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 C7orf69Q9H7B7 122 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 FBXL7Q9UJT9 491 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 MOB4Q9Y3A3 225 aa8.21□□□□□ -1.1
POLR2J3-201ENST00000379340 TRAV34A0A0B4J273 112 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 IGHV4-61A0A0C4DH41 118 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 SNURFLB1AK76 121 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 MRPS12O15235 138 aaKnown RBP8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 OR2J3O76001 311 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 HLA-DQA1P01909 254 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 AMY1AP04745 511 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 USF2Q15853 346 aaPredicted RBP8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 TMEM75Q8N9X5 138 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 NUDT10Q8NFP7 164 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 WIPF2Q8TF74 440 aaPredicted RBP8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 NUDT11Q96G61 164 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 ATP6V0BQ99437 205 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 MEGF9Q9H1U4 602 aa8.2□□□□□ -1.1
POLR2J3-201ENST00000379340 ATP6V0E1O15342 81 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 AMBPP02760 352 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 CBLN1P23435 193 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 IER3P46695 156 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 RAB9AP51151 201 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 CRIP2P52943 208 aaPredicted RBP8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 PYY3Q5JQD4 70 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms