RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 LEMD1Q68G75 181 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 F8P00451 2351 aa18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 FN1P02751 2386 aaKnown RBP18.86■□□□□ 0.61
ECHDC3-201ENST00000379215 FAM74A7A6NL05 159 aa18.85■□□□□ 0.61
ECHDC3-201ENST00000379215 HIST1H1EP10412 219 aaKnown RBP18.85■□□□□ 0.61
ECHDC3-201ENST00000379215 TCTEX1D4Q5JR98 221 aa18.85■□□□□ 0.61
ECHDC3-201ENST00000379215 TMEM250H0YL14 139 aa18.85■□□□□ 0.61
ECHDC3-201ENST00000379215 SRP19P09132 144 aaKnown RBP18.85■□□□□ 0.61
ECHDC3-201ENST00000379215 OR8I2Q8N0Y5 310 aa18.85■□□□□ 0.61
ECHDC3-201ENST00000379215 UFC1Q9Y3C8 167 aa18.85■□□□□ 0.61
ECHDC3-201ENST00000379215 F6UZH7 168 aa18.84■□□□□ 0.61
ECHDC3-201ENST00000379215 K7EMT4 169 aa18.84■□□□□ 0.61
ECHDC3-201ENST00000379215 BUB3O43684 328 aa18.84■□□□□ 0.61
ECHDC3-201ENST00000379215 NBEAP1P0C6P0 100 aa18.84■□□□□ 0.61
ECHDC3-201ENST00000379215 SEC11CQ9BY50 192 aa18.84■□□□□ 0.61
ECHDC3-201ENST00000379215 DAZ1Q9NQZ3 744 aaKnown RBP18.84■□□□□ 0.61
ECHDC3-201ENST00000379215 U3KQE9 123 aa18.84■□□□□ 0.61
ECHDC3-201ENST00000379215 IGHV3OR16-8A0A075B7F1 116 aa18.83■□□□□ 0.61
ECHDC3-201ENST00000379215 A0A1W2PS18 150 aa18.83■□□□□ 0.61
ECHDC3-201ENST00000379215 C9JQL5 133 aa18.83■□□□□ 0.61
ECHDC3-201ENST00000379215 BMI1P35226 326 aa18.83■□□□□ 0.61
ECHDC3-201ENST00000379215 CD81P60033 236 aa18.83■□□□□ 0.61
ECHDC3-201ENST00000379215 UNQ9165/PRO28630Q6UXU0 137 aa18.83■□□□□ 0.61
ECHDC3-201ENST00000379215 GRAMD2BQ96HH9 432 aa18.83■□□□□ 0.61
ECHDC3-201ENST00000379215 ZNF320A2RRD8 509 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 F8W036 122 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 PROK1P58294 105 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 REC114Q7Z4M0 266 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 LINC00052Q96N35 136 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 TCEAL7Q9BRU2 100 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 YTHDF2Q9Y5A9 579 aaKnown RBP18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 TSSC4Q9Y5U2 329 aaPredicted RBP18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 IGHV4OR15-8A0A075B7B6 117 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 A0A087WW49 117 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 LGALS9O00182 355 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 IGLC2P0DOY2 106 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 PDE6HQ13956 83 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 SOHLH1Q5JUK2 328 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 KLHL30-AS1Q8NEE0 82 aa18.82■□□□□ 0.6
ECHDC3-201ENST00000379215 LINC01619G3V211 115 aa18.81■□□□□ 0.6
ECHDC3-201ENST00000379215 HAX1O00165 279 aa18.81■□□□□ 0.6
ECHDC3-201ENST00000379215 MRPS12O15235 138 aaKnown RBP18.81■□□□□ 0.6
ECHDC3-201ENST00000379215 GALR1P47211 349 aa18.81■□□□□ 0.6
ECHDC3-201ENST00000379215 DPF1Q92782 380 aa18.81■□□□□ 0.6
ECHDC3-201ENST00000379215 ATP5G3P48201 142 aa18.8■□□□□ 0.6
ECHDC3-201ENST00000379215 MEOX2P50222 304 aa18.8■□□□□ 0.6
ECHDC3-201ENST00000379215 C1QL4Q86Z23 238 aa18.8■□□□□ 0.6
ECHDC3-201ENST00000379215 CYB561D1Q8N8Q1 229 aa18.8■□□□□ 0.6
ECHDC3-201ENST00000379215 ELOVL1Q9BW60 279 aa18.8■□□□□ 0.6
ECHDC3-201ENST00000379215 CD28P10747 220 aa18.79■□□□□ 0.6
ECHDC3-201ENST00000379215 ATF4P18848 351 aaPredicted RBP18.79■□□□□ 0.6
ECHDC3-201ENST00000379215 HOXD3P31249 432 aaPredicted RBP18.79■□□□□ 0.6
ECHDC3-201ENST00000379215 C10orf91Q5T1B1 145 aa18.79■□□□□ 0.6
ECHDC3-201ENST00000379215 LYPD1Q8N2G4 141 aa18.79■□□□□ 0.6
ECHDC3-201ENST00000379215 BLNKQ8WV28 456 aa18.79■□□□□ 0.6
ECHDC3-201ENST00000379215 CARHSP1Q9Y2V2 147 aaKnown RBP18.79■□□□□ 0.6
ECHDC3-201ENST00000379215 TRBV19A0A075B6N1 114 aa18.78■□□□□ 0.6
ECHDC3-201ENST00000379215 A8MWP6 167 aa18.78■□□□□ 0.6
ECHDC3-201ENST00000379215 ZNF207O43670 478 aaKnown RBP18.78■□□□□ 0.6
ECHDC3-201ENST00000379215 OR1N2Q8NGR9 330 aa18.78■□□□□ 0.6
ECHDC3-201ENST00000379215 ZNF586Q9NXT0 402 aa18.78■□□□□ 0.6
ECHDC3-201ENST00000379215 IGHV7-4-1A0A0J9YVY3 117 aa18.78■□□□□ 0.6
ECHDC3-201ENST00000379215 CCDC28AQ8IWP9 274 aa18.78■□□□□ 0.6
ECHDC3-201ENST00000379215 A0A087X0K7 114 aa18.77■□□□□ 0.6
ECHDC3-201ENST00000379215 H3BQ15 152 aa18.77■□□□□ 0.6
ECHDC3-201ENST00000379215 ZNF253O75346 499 aa18.77■□□□□ 0.6
ECHDC3-201ENST00000379215 FOXL1Q12952 345 aa18.77■□□□□ 0.6
ECHDC3-201ENST00000379215 FAM74A3Q4VXF1 159 aa18.77■□□□□ 0.6
ECHDC3-201ENST00000379215 C16orf54Q6UWD8 224 aa18.77■□□□□ 0.6
ECHDC3-201ENST00000379215 OR11H1Q8NG94 326 aa18.77■□□□□ 0.6
ECHDC3-201ENST00000379215 GGTLC3B5MD39 225 aa18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 ADCYAP1P18509 176 aa18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 CEBPGP53567 150 aa18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 RANP62826 216 aaKnown RBP18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 C11orf52Q96A22 123 aa18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 RPUSD4Q96CM3 377 aaKnown RBP18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 CITED2Q99967 270 aaPredicted RBP18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 OTORQ9NRC9 128 aa18.76■□□□□ 0.59
ECHDC3-201ENST00000379215 SUMO1P63165 101 aaKnown RBP18.75■□□□□ 0.59
ECHDC3-201ENST00000379215 PSG9Q00887 426 aa18.75■□□□□ 0.59
ECHDC3-201ENST00000379215 C18orf65Q6ZTR6 163 aa18.75■□□□□ 0.59
ECHDC3-201ENST00000379215 APOHP02749 345 aaPredicted RBP18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 MYCNOSP40205 109 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 KLF5Q13887 457 aaPredicted RBP18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 SIGLEC15Q6ZMC9 328 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 SVBPQ8N300 66 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 GLMPQ8WWB7 406 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 Q9H3A6 140 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 SMPXQ9UHP9 88 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 CUBNO60494 3623 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 HELTA6NFD8 242 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 APOC3P02656 99 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 SYNJ2BPP57105 145 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 TM4SF20Q53R12 229 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 FAM90A2PQ658T7 463 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 PEMTQ9UBM1 199 aa18.74■□□□□ 0.59
ECHDC3-201ENST00000379215 ZNF785A8K8V0 405 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 DEFB136Q30KP8 78 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 C8orf86Q6ZUL3 223 aa18.73■□□□□ 0.59
ECHDC3-201ENST00000379215 C11orf44Q8N8P7 122 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms