RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HAPLN4Q86UW8 402 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 PYGO1Q9Y3Y4 419 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 WNK3Q9BYP7 1800 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 EVPLQ92817 2033 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 MPV17L2Q567V2 206 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 PTH2Q96A98 100 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 CCDC140Q96MF4 163 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 PIP4P1Q86T03 277 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 NCOR1O75376 2440 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 CACNA1DQ01668 2161 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 BCE1O60756 84 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 CACNA1HO95180 2353 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 A0A1B0GUS0 222 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 IGLC7A0M8Q6 106 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 CITED2Q99967 270 aaPredicted RBP3.97□□□□□ -1.77
PCDH9-201ENST00000377861 CDKN1AP38936 164 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 HES7Q9BYE0 225 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 A0A1B0GX51 115 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 A0A1W2PR80 420 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 LOC285556D6RIA3 1793 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 RIF1Q5UIP0 2472 aaKnown RBP3.97□□□□□ -1.77
PCDH9-201ENST00000377861 A0A087X0K7 114 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 TEX48A0A1B0GUV7 120 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 LINC00473A8K010 186 aa3.97□□□□□ -1.77
PCDH9-201ENST00000377861 A0A087WX48 190 aa3.96□□□□□ -1.77
PCDH9-201ENST00000377861 PMS2P5A8MQ11 134 aa3.96□□□□□ -1.77
PCDH9-201ENST00000377861 LOXL1Q08397 574 aaPredicted RBP3.96□□□□□ -1.77
PCDH9-201ENST00000377861 TCTEX1D4Q5JR98 221 aa3.96□□□□□ -1.77
PCDH9-201ENST00000377861 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.77
PCDH9-201ENST00000377861 COL4A5P29400 1685 aa3.96□□□□□ -1.77
PCDH9-201ENST00000377861 Q1RN00 199 aa3.96□□□□□ -1.77
PCDH9-201ENST00000377861 C19orf71A6NCJ1 209 aa3.96□□□□□ -1.77
PCDH9-201ENST00000377861 WT1P19544 449 aaPredicted RBP3.96□□□□□ -1.77
PCDH9-201ENST00000377861 CENPVL3A0A0U1RRI6 287 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 CCL21O00585 134 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 C11orf44Q8N8P7 122 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 IGLV1-47P01700 117 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 RELTQ969Z4 430 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 A0A1W2PPM0 123 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 A4D1N5 150 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 C15orf53Q8NAA6 179 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 DAZ2Q13117 558 aaKnown RBP3.96□□□□□ -1.78
PCDH9-201ENST00000377861 DAZ4Q86SG3 579 aaKnown RBP3.96□□□□□ -1.78
PCDH9-201ENST00000377861 DAZ3Q9NR90 486 aaKnown RBP3.96□□□□□ -1.78
PCDH9-201ENST00000377861 FDCSPQ8NFU4 85 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 FOXC2Q99958 501 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 CD177Q8N6Q3 437 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 SMIM2Q9BVW6 85 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF726P1Q15940 193 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 SH3BGRL2Q9UJC5 107 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 GVINP1Q7Z2Y8 2422 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 TNFRSF6BO95407 300 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 HCP5Q6MZN7 132 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 TIMM17BO60830 172 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 ST6GALNAC6Q969X2 333 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 K7EIM0 57 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 FOXG1P55316 489 aaPredicted RBP3.96□□□□□ -1.78
PCDH9-201ENST00000377861 SSBP2P81877 361 aaPredicted RBP3.96□□□□□ -1.78
PCDH9-201ENST00000377861 MRPS36P82909 103 aaKnown RBP3.96□□□□□ -1.78
PCDH9-201ENST00000377861 GAGE5Q13069 117 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 GAGE6Q13070 117 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 TRBV10-1A0A0K0K1A3 114 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 FXYD5Q96DB9 178 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 PRORYQ9H606 182 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 G3V4G9 280 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF415Q09FC8 603 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 KLK9Q2XQG4 91 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 KLK9Q9UKQ9 250 aa3.96□□□□□ -1.78
PCDH9-201ENST00000377861 CTRLP40313 264 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 HERVK_113P63121 156 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 Q6ZWC4 215 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 RASL10AQ92737 203 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 POLR3KQ9Y2Y1 108 aaPredicted RBP3.95□□□□□ -1.78
PCDH9-201ENST00000377861 KIAA1217Q5T5P2 1943 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 A0A1B0GXF2 115 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 WI2-2373I1.2A0A1W2PRP0 233 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 K7EP34 96 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 TPRX1Q8N7U7 411 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 RNASE7Q9H1E1 156 aaKnown RBP3.95□□□□□ -1.78
PCDH9-201ENST00000377861 IGKV1-39P01597 117 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 IGKV1D-39P04432 117 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 JMJD7-PLA2G4BH0Y9G9 81 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 LYZL1Q6UWQ5 148 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 GTSF1Q8WW33 167 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 NHP2Q9NX24 153 aaKnown RBP3.95□□□□□ -1.78
PCDH9-201ENST00000377861 FZR1Q9UM11 496 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 CEND1Q8N111 149 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 ZFP2Q6ZN57 461 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 LOC101059948A0A1B0GTJ6 334 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 LY6DQ14210 128 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 C11orf53Q8IXP5 236 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 MCM3APO60318 1980 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 RPL39P5Q59GN2 51 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 I3L3M4 83 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 CEP250Q9BV73 2442 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 H3BT86 120 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 BSPH1Q075Z2 132 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 ZNF826PQ6ZT77 177 aa3.95□□□□□ -1.78
PCDH9-201ENST00000377861 SRRM4A7MD48 611 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms