RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 Q6ZRG5 221 aa15.47■□□□□ 0.07
MAP1LC3A-202ENST00000374837 S100A7AQ86SG5 101 aa15.47■□□□□ 0.07
MAP1LC3A-202ENST00000374837 TMEM37Q8WXS4 190 aa15.47■□□□□ 0.07
MAP1LC3A-202ENST00000374837 GPR82Q96P67 336 aa15.47■□□□□ 0.07
MAP1LC3A-202ENST00000374837 KIR2DL5BA0A0G2JN68 375 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 KIR2DL5BA0A0G2JPC4 375 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 KNCNA6PVL3 124 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 SOCS3O14543 225 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 COX7A2P2O60397 106 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 MPDU1O75352 247 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 GIPP09681 153 aaPredicted RBP15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 Q5BKY6 102 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 LINC00305Q7Z4B0 112 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 KIR2DL5AQ8N109 375 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 KIR2DL5BQ8NHK3 375 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 DNAJC4Q9NNZ3 241 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 SLC39A9Q9NUM3 307 aa15.46■□□□□ 0.07
MAP1LC3A-202ENST00000374837 ELOA3CA0A087WX78 387 aaPredicted RBP15.45■□□□□ 0.06
MAP1LC3A-202ENST00000374837 ID1P41134 155 aa15.45■□□□□ 0.06
MAP1LC3A-202ENST00000374837 B2MP61769 119 aa15.45■□□□□ 0.06
MAP1LC3A-202ENST00000374837 C10orf113Q5VZT2 155 aa15.45■□□□□ 0.06
MAP1LC3A-202ENST00000374837 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.45■□□□□ 0.06
MAP1LC3A-202ENST00000374837 NPCDR1Q9BY65 106 aa15.45■□□□□ 0.06
MAP1LC3A-202ENST00000374837 PXMP4Q9Y6I8 212 aa15.45■□□□□ 0.06
MAP1LC3A-202ENST00000374837 UBE2CO00762 179 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 RPL7P18124 248 aaKnown RBP15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 STHQ8IWL8 128 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 ASB13Q8WXK3 278 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 LINC00052Q96N35 136 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 WWC2-AS2Q96NR7 200 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 ATP5SQ99766 215 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 SMIM3Q9BZL3 60 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 WDR61Q9GZS3 305 aaKnown RBP15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 CSTL1Q9H114 145 aa15.44■□□□□ 0.06
MAP1LC3A-202ENST00000374837 PSMB3P49720 205 aa15.43■□□□□ 0.06
MAP1LC3A-202ENST00000374837 MEOX2P50222 304 aa15.43■□□□□ 0.06
MAP1LC3A-202ENST00000374837 ACTL10Q5JWF8 245 aa15.43■□□□□ 0.06
MAP1LC3A-202ENST00000374837 MORN5Q5VZ52 161 aa15.43■□□□□ 0.06
MAP1LC3A-202ENST00000374837 OR1L4Q8NGR5 311 aa15.43■□□□□ 0.06
MAP1LC3A-202ENST00000374837 OVOL2Q9BRP0 275 aa15.43■□□□□ 0.06
MAP1LC3A-202ENST00000374837 WFDC1Q9HC57 220 aa15.43■□□□□ 0.06
MAP1LC3A-202ENST00000374837 ISLRO14498 428 aa15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 MRPS12O15235 138 aaKnown RBP15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 ATF4P18848 351 aaPredicted RBP15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 FGL1Q08830 312 aa15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 Q6ZWC4 215 aa15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 TRPT1Q86TN4 253 aaKnown RBP15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 C16orf92Q96LL3 132 aa15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 RNF24Q9Y225 148 aa15.42■□□□□ 0.06
MAP1LC3A-202ENST00000374837 SAMD13Q5VXD3 122 aa15.41■□□□□ 0.06
MAP1LC3A-202ENST00000374837 PFDN5Q99471 154 aa15.41■□□□□ 0.06
MAP1LC3A-202ENST00000374837 TRAV5A0A0B4J249 113 aa15.4■□□□□ 0.06
MAP1LC3A-202ENST00000374837 DEFB1P60022 68 aa15.4■□□□□ 0.06
MAP1LC3A-202ENST00000374837 DEFB135Q30KP9 77 aa15.4■□□□□ 0.06
MAP1LC3A-202ENST00000374837 ZNF709Q8N972 641 aa15.4■□□□□ 0.06
MAP1LC3A-202ENST00000374837 GATAD1Q8WUU5 269 aa15.4■□□□□ 0.06
MAP1LC3A-202ENST00000374837 C20orf173Q96LM9 149 aa15.4■□□□□ 0.06
MAP1LC3A-202ENST00000374837 A0A087X0K7 114 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 TRAV8-2A0A0B4J237 113 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 SPRY2O43597 315 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 IFNA5P01569 189 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 GCSAMLQ5JQS6 135 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 IGFL4Q6B9Z1 124 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 OR2T35Q8NGX2 323 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 RNF183Q96D59 192 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 TP53TG1Q9Y2A0 90 aa15.39■□□□□ 0.05
MAP1LC3A-202ENST00000374837 H3BMM0 161 aa15.38■□□□□ 0.05
MAP1LC3A-202ENST00000374837 GDF5OSQ5U4N7 250 aa15.38■□□□□ 0.05
MAP1LC3A-202ENST00000374837 BPIFA4PQ86YQ2 179 aa15.38■□□□□ 0.05
MAP1LC3A-202ENST00000374837 SCGB1C1Q8TD33 95 aa15.38■□□□□ 0.05
MAP1LC3A-202ENST00000374837 AQP10Q96PS8 301 aa15.38■□□□□ 0.05
MAP1LC3A-202ENST00000374837 C17orf112F2Z3M2 114 aa15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 CA1P00915 261 aaPredicted RBP15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 SNRPCP09234 159 aaKnown RBP15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 GIG44P09565 113 aaPredicted RBP15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 HLA-DRB4P13762 266 aa15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 FOXI2Q6ZQN5 318 aa15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 SAV1Q9H4B6 383 aaPredicted RBP15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 EDA2RQ9HAV5 297 aa15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 KCNIP2Q9NS61 270 aa15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 HLA-DRB4X5D2U9 266 aa15.37■□□□□ 0.05
MAP1LC3A-202ENST00000374837 MORN3Q6PF18 240 aaPredicted RBP15.36■□□□□ 0.05
MAP1LC3A-202ENST00000374837 PARD6GQ9BYG4 376 aaPredicted RBP15.36■□□□□ 0.05
MAP1LC3A-202ENST00000374837 RPRMQ9NS64 109 aa15.36■□□□□ 0.05
MAP1LC3A-202ENST00000374837 FXYD6-FXYD2A0A087WZ82 144 aa15.35■□□□□ 0.05
MAP1LC3A-202ENST00000374837 F6UB75 175 aa15.35■□□□□ 0.05
MAP1LC3A-202ENST00000374837 G3V3Q6 166 aa15.35■□□□□ 0.05
MAP1LC3A-202ENST00000374837 SPP1P10451 314 aa15.35■□□□□ 0.05
MAP1LC3A-202ENST00000374837 RNF182Q8N6D2 247 aa15.35■□□□□ 0.05
MAP1LC3A-202ENST00000374837 LRRC20Q8TCA0 184 aa15.35■□□□□ 0.05
MAP1LC3A-202ENST00000374837 H3BQ15 152 aa15.34■□□□□ 0.05
MAP1LC3A-202ENST00000374837 H3BTX0 84 aa15.34■□□□□ 0.05
MAP1LC3A-202ENST00000374837 IGLC2P0DOY2 106 aa15.34■□□□□ 0.05
MAP1LC3A-202ENST00000374837 HLA-DMBP28068 263 aa15.34■□□□□ 0.05
MAP1LC3A-202ENST00000374837 FAM78BQ5VT40 261 aa15.34■□□□□ 0.05
MAP1LC3A-202ENST00000374837 SPATA31B1PQ5VZV4 182 aa15.34■□□□□ 0.05
MAP1LC3A-202ENST00000374837 RFNGQ9Y644 331 aa15.34■□□□□ 0.05
MAP1LC3A-202ENST00000374837 A0A0J9YX75 114 aa15.33■□□□□ 0.04
MAP1LC3A-202ENST00000374837 C4BPBP20851 252 aa15.33■□□□□ 0.04
MAP1LC3A-202ENST00000374837 FFAR4Q5NUL3 377 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms