RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PMS2P5A8MQ11 134 aa13.61□□□□□ -0.23
TMEM53-201ENST00000372235 K7EPK0 472 aa13.61□□□□□ -0.23
TMEM53-201ENST00000372235 LINC00869P0C866 280 aa13.61□□□□□ -0.23
TMEM53-201ENST00000372235 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
TMEM53-201ENST00000372235 LINC00299Q6ZSB3 139 aa13.61□□□□□ -0.23
TMEM53-201ENST00000372235 SHANK2-AS3Q9BTD1 123 aa13.61□□□□□ -0.23
TMEM53-201ENST00000372235 DEFB131BA0A096LNP1 70 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 H3BRN7 92 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 L7N2F9 121 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 HBE1P02100 147 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 METTL15P1P0C7V9 234 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 GATA2P23769 480 aaPredicted RBP13.6□□□□□ -0.23
TMEM53-201ENST00000372235 B2MP61769 119 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 VAMP2P63027 116 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 ZNF546Q86UE3 836 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 ZNF709Q8N972 641 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 CCDC32Q9BV29 185 aa13.6□□□□□ -0.23
TMEM53-201ENST00000372235 IGHV4-4A0A075B6R2 117 aa13.59□□□□□ -0.23
TMEM53-201ENST00000372235 OR5G3P0C626 314 aa13.59□□□□□ -0.23
TMEM53-201ENST00000372235 RAB31Q13636 194 aa13.59□□□□□ -0.23
TMEM53-201ENST00000372235 C12orf74Q32Q52 190 aa13.59□□□□□ -0.23
TMEM53-201ENST00000372235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.59□□□□□ -0.23
TMEM53-201ENST00000372235 TMEM182Q6ZP80 229 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-201ENST00000372235 FAM210BQ96KR6 192 aa13.59□□□□□ -0.23
TMEM53-201ENST00000372235 IGHV3OR16-12A0A075B7B8 117 aa13.58□□□□□ -0.24
TMEM53-201ENST00000372235 A8MTW9 85 aa13.58□□□□□ -0.24
TMEM53-201ENST00000372235 GOSR2O14653 212 aa13.58□□□□□ -0.24
TMEM53-201ENST00000372235 TCRBP04435 133 aa13.58□□□□□ -0.24
TMEM53-201ENST00000372235 PVALBP20472 110 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-201ENST00000372235 RRAS2P62070 204 aaPredicted RBP13.58□□□□□ -0.24
TMEM53-201ENST00000372235 RPP25LQ8N5L8 163 aaKnown RBP13.58□□□□□ -0.24
TMEM53-201ENST00000372235 LRRC20Q8TCA0 184 aa13.58□□□□□ -0.24
TMEM53-201ENST00000372235 NDUFAF3Q9BU61 184 aa13.58□□□□□ -0.24
TMEM53-201ENST00000372235 EPPK1P58107 5090 aaKnown RBP13.57□□□□□ -0.24
TMEM53-201ENST00000372235 A0A087X0K7 114 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 DEDDO75618 318 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 CXCL2P19875 107 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 FXYD7P58549 80 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 FGL1Q08830 312 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 RRN3P1Q2M238 152 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 ZNF431Q8TF32 576 aaPredicted RBP13.57□□□□□ -0.24
TMEM53-201ENST00000372235 IGF2BP2-AS1Q96M15 143 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 TMEM208Q9BTX3 173 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 SCRT1Q9BWW7 348 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 ARL6Q9H0F7 186 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 SLC35B3Q9H1N7 401 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 CELA1Q9UNI1 258 aa13.57□□□□□ -0.24
TMEM53-201ENST00000372235 C7orf66A4D0T2 115 aa13.56□□□□□ -0.24
TMEM53-201ENST00000372235 PLA2G10O15496 165 aa13.56□□□□□ -0.24
TMEM53-201ENST00000372235 MBPP02686 304 aaPredicted RBP13.56□□□□□ -0.24
TMEM53-201ENST00000372235 P0DMU3 169 aa13.56□□□□□ -0.24
TMEM53-201ENST00000372235 FAM231AP0DMU4 169 aa13.56□□□□□ -0.24
TMEM53-201ENST00000372235 FAM231CP0DMU5 169 aa13.56□□□□□ -0.24
TMEM53-201ENST00000372235 OXA1LQ15070 435 aa13.56□□□□□ -0.24
TMEM53-201ENST00000372235 RCL1Q9Y2P8 373 aaKnown RBP13.56□□□□□ -0.24
TMEM53-201ENST00000372235 C5orf51A6NDU8 294 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 F6UB75 175 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 INSP01308 110 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 DEFB1P60022 68 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 MZT2BQ6NZ67 158 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 ZNF738Q8NE65 137 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 S100ZQ8WXG8 99 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 C20orf173Q96LM9 149 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 ARV1Q9H2C2 271 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 PPP1R14DQ9NXH3 145 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 BIRC6Q9NR09 4857 aa13.55□□□□□ -0.24
TMEM53-201ENST00000372235 FAM25EA8MYX2 175 aa13.54□□□□□ -0.24
TMEM53-201ENST00000372235 BCAP31P51572 246 aa13.54□□□□□ -0.24
TMEM53-201ENST00000372235 CNN1P51911 297 aaKnown RBP13.54□□□□□ -0.24
TMEM53-201ENST00000372235 EMP1P54849 157 aa13.54□□□□□ -0.24
TMEM53-201ENST00000372235 Q6ZRG5 221 aa13.54□□□□□ -0.24
TMEM53-201ENST00000372235 BPIFA4PQ86YQ2 179 aa13.54□□□□□ -0.24
TMEM53-201ENST00000372235 C12orf45Q8N5I9 185 aaPredicted RBP13.54□□□□□ -0.24
TMEM53-201ENST00000372235 SLC50A1Q9BRV3 221 aa13.54□□□□□ -0.24
TMEM53-201ENST00000372235 DKK2Q9UBU2 259 aa13.54□□□□□ -0.24
TMEM53-201ENST00000372235 TRAV6A0A075B6T7 132 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 LOC102723971A0A1B0GUV8 181 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 FAM240BA0A1B0GVZ2 78 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 AGPAT2O15120 278 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 SLC38A11Q08AI6 406 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 LCN15Q6UWW0 184 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 C2orf50Q96LR7 162 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 UHRF2Q96PU4 802 aa13.53□□□□□ -0.24
TMEM53-201ENST00000372235 TRAV8-2A0A0B4J237 113 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 COX7A2P2O60397 106 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 CCNKO75909 580 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 H2AFB2P0C5Z0 115 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 CXCL3P19876 107 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 CAV2P51636 162 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 FAM222AQ5U5X8 452 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 AMTNQ6UX39 209 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 GSG1LQ6UXU4 331 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 LINC00305Q7Z4B0 112 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 C1orf158Q8N1D5 194 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 TMEM256Q8N2U0 113 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 OR11H7Q8NGC8 314 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 C17orf77Q96MU5 243 aa13.52□□□□□ -0.25
TMEM53-201ENST00000372235 LSM5Q9Y4Y9 91 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms