RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 GSX1Q9H4S2 264 aaPredicted RBP11.04□□□□□ -0.64
USF1-202ENST00000368020 ZNF492Q9P255 531 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
USF1-202ENST00000368020 NPFFO15130 113 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 IL4P05112 153 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 CRISP2P16562 243 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 CBLN1P23435 193 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 SAA4P35542 130 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 JOSD1Q15040 202 aaPredicted RBP11.03□□□□□ -0.64
USF1-202ENST00000368020 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 ASPHD1Q5U4P2 390 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 ATP5L2Q7Z4Y8 100 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 Q8N9W7 124 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 FAM168AQ92567 244 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 NAT8BQ9UHF3 227 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 CCDC168Q8NDH2 2452 aa11.03□□□□□ -0.64
USF1-202ENST00000368020 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 SERTM2A0A1B0GWG4 89 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 Q56UQ5 140 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 CLEC2AQ6UVW9 174 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
USF1-202ENST00000368020 C10orf105Q8TEF2 133 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 TSKUQ8WUA8 353 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 LINC00479Q96M42 142 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 MLST8Q9BVC4 326 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.65
USF1-202ENST00000368020 SOX21Q9Y651 276 aaPredicted RBP11.02□□□□□ -0.65
USF1-202ENST00000368020 NOTCH2Q04721 2471 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 WNK2Q9Y3S1 2297 aa11.02□□□□□ -0.65
USF1-202ENST00000368020 TRBV19A0A075B6N1 114 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 ESDP10768 282 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 GNG5P63218 68 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 NDPQ00604 133 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 Q0VG73 95 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 NUDT10Q8NFP7 164 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 NUDT11Q96G61 164 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 C7orf69Q9H7B7 122 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 ZNF586Q9NXT0 402 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 FLNBO75369 2602 aaKnown RBP11.01□□□□□ -0.65
USF1-202ENST00000368020 TRAV34A0A0B4J273 112 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 FAM231BA6NCW3 169 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 A8MWL6 223 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 VWC2LB2RUY7 222 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 IGLC2P0DOY2 106 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 RAB9AP51151 201 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 PAX8Q06710 450 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 OR10J3Q5JRS4 329 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 LEMD1Q68G75 181 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 PRSS57Q6UWY2 283 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 TMEM75Q8N9X5 138 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 OR4B1Q8NGF8 309 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 DAZAP1Q96EP5 407 aaKnown RBP11.01□□□□□ -0.65
USF1-202ENST00000368020 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
USF1-202ENST00000368020 CREBBPQ92793 2442 aa11□□□□□ -0.65
USF1-202ENST00000368020 FBLL1A6NHQ2 334 aaKnown RBP11□□□□□ -0.65
USF1-202ENST00000368020 NDUFB8O95169 186 aa11□□□□□ -0.65
USF1-202ENST00000368020 RPL7P18124 248 aaKnown RBP11□□□□□ -0.65
USF1-202ENST00000368020 TMEM136Q6ZRR5 245 aa11□□□□□ -0.65
USF1-202ENST00000368020 AJUBAQ96IF1 538 aa11□□□□□ -0.65
USF1-202ENST00000368020 ATP6V0BQ99437 205 aa11□□□□□ -0.65
USF1-202ENST00000368020 RPP21Q9H633 154 aaKnown RBP11□□□□□ -0.65
USF1-202ENST00000368020 AAMDCQ9H7C9 122 aa11□□□□□ -0.65
USF1-202ENST00000368020 ZFP30Q9Y2G7 519 aa11□□□□□ -0.65
USF1-202ENST00000368020 P01737 135 aa10.99□□□□□ -0.65
USF1-202ENST00000368020 TPPP2P59282 170 aa10.99□□□□□ -0.65
USF1-202ENST00000368020 PSG9Q00887 426 aa10.99□□□□□ -0.65
USF1-202ENST00000368020 Q86TA4 180 aa10.99□□□□□ -0.65
USF1-202ENST00000368020 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
USF1-202ENST00000368020 MAP1AP78559 2803 aaPredicted RBP10.99□□□□□ -0.65
USF1-202ENST00000368020 CENPVL3A0A0U1RRI6 287 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 TSTD3H0UI37 97 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 HAX1O00165 279 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 BMPR1BO00238 502 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 EGR2P11161 476 aaPredicted RBP10.98□□□□□ -0.65
USF1-202ENST00000368020 SLC25A16P16260 332 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 IQCJQ1A5X6 159 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
USF1-202ENST00000368020 PRR27Q6MZM9 219 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 TMUB1Q9BVT8 246 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 PRSS22Q9GZN4 317 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 FBXL7Q9UJT9 491 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 ABCA1O95477 2261 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 ZNF253O75346 499 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 TCL1AP56279 114 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 RAB4BP61018 213 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 FBLN7Q53RD9 439 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 UNQ5815/PRO19632Q6UWF5 114 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 SIGLEC15Q6ZMC9 328 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 RABAC1Q9UI14 185 aa10.98□□□□□ -0.65
USF1-202ENST00000368020 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
USF1-202ENST00000368020 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 C19orf71A6NCJ1 209 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
USF1-202ENST00000368020 MRPS12O15235 138 aaKnown RBP10.97□□□□□ -0.65
USF1-202ENST00000368020 OR2J3O76001 311 aa10.97□□□□□ -0.65
USF1-202ENST00000368020 IGHV1-69P01742 117 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms