RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 THAP8Q8NA92 274 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 DNAJC13O75165 2243 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 AGMATQ9BSE5 352 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 IGKV1D-17A0A075B6S4 117 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 LY6HO94772 140 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 TMEM158Q8WZ71 300 aa12.76□□□□□ -0.37
NUCKS1-201ENST00000367142 IL17RELQ6ZVW7 336 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 AZU1P20160 251 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 CR1LQ2VPA4 569 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 TNFRSF6BO95407 300 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 NMSQ5H8A3 153 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 SUMO4Q6EEV6 95 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 TRBV6-6A0A0A6YYG2 114 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 LY6G6FQ5SQ64 297 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 PMVKQ15126 192 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 TMEM242Q9NWH2 141 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 KNTC1P50748 2209 aa12.75□□□□□ -0.37
NUCKS1-201ENST00000367142 BCL6BQ8N143 479 aaPredicted RBP12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 SHANK2-AS3Q9BTD1 123 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 MAPK1IP1LQ8NDC0 245 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 LY96Q9Y6Y9 160 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 PARP14Q460N5 1801 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 C17orf82Q86X59 251 aaPredicted RBP12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 NUP214P35658 2090 aaPredicted RBP12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 DKK1O94907 266 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 H0YIZ8 118 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 H3BMM0 161 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 GAGE2BQ13066 116 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 GSN-AS1Q9NRJ2 163 aa12.74□□□□□ -0.37
NUCKS1-201ENST00000367142 A0A087WV48 116 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 PDE6HQ13956 83 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 Q6P435 159 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 DMRTC2Q8IXT2 367 aaPredicted RBP12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 VWC2Q2TAL6 325 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 GAGE2AQ6NT46 116 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 WDR90Q96KV7 1748 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 SRSF3P84103 164 aaKnown RBP12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 NUP35Q8NFH5 326 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 COL11A1P12107 1806 aaPredicted RBP12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 MAP1BP46821 2468 aaKnown RBP12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
NUCKS1-201ENST00000367142 J3QRE1 110 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 NDUFB8O95169 186 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 IGKV1-5P01602 117 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 TMEM14EPQ6UXP3 125 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 IGHV2-70DA0A0C4DH43 119 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 ESDP10768 282 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 GUSBP1Q15486 140 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 Q71RC1 249 aaPredicted RBP12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 Q86TA4 180 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 C22orf46C9J442 243 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 BTCP35070 178 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 NDUFAF3Q9BU61 184 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 LINC00473A8K010 186 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 PAX9P55771 341 aa12.72□□□□□ -0.37
NUCKS1-201ENST00000367142 TRAV1-1A0A0B4J248 108 aa12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 KNCNA6PVL3 124 aa12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 FGF16O43320 207 aa12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 ARMS2P0C7Q2 107 aa12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 GAS1P54826 345 aa12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 ANKRD36A6QL64 1941 aa12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 FNDC10F2Z333 226 aa12.71□□□□□ -0.37
NUCKS1-201ENST00000367142 GAGE12BA1L429 117 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 I3L3M4 83 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 GAGE7O76087 117 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 GAGE12FP0CL80 117 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 GAGE12GP0CL81 117 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 GAGE12IP0CL82 117 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 SPINK13Q1W4C9 94 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 POLR2AP24928 1970 aaKnown RBP12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BKO60814 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BJP06899 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BOP23527 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BBP33778 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BDP58876 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BCP62807 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST2H2BEQ16778 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BHQ93079 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 TMEM141Q96I45 108 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BNQ99877 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 HIST1H2BMQ99879 126 aa12.71□□□□□ -0.38
NUCKS1-201ENST00000367142 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 C1orf122Q6ZSJ8 110 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 TDRD6O60522 2096 aaKnown RBP12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 PRR30Q53SZ7 412 aaPredicted RBP12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 GLRX5Q86SX6 157 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 NINQ8N4C6 2090 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 NTF4P34130 210 aa12.7□□□□□ -0.38
NUCKS1-201ENST00000367142 ZNF362Q5T0B9 420 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 658 ms