RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ZBTB8BQ8NAP8 495 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 GPR82Q96P67 336 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 RSG1Q9BU20 258 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SLC25A39Q9BZJ4 359 aaPredicted RBP9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SLC35B3Q9H1N7 401 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SLC25A22Q9H936 323 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 NDUFA13Q9P0J0 144 aa9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 RCL1Q9Y2P8 373 aaKnown RBP9.8□□□□□ -0.84
TNFRSF1A-202ENST00000366159 DNAH17Q9UFH2 4485 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 TSC22D2O75157 780 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 FXYD7P58549 80 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PSG9Q00887 426 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 IAH1Q2TAA2 248 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 PATE2Q6UY27 113 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 OR4B1Q8NGF8 309 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 C16orf92Q96LL3 132 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SHANK2-AS3Q9BTD1 123 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 RNF126Q9BV68 326 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 TMEM147Q9BVK8 224 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 NPVFQ9HCQ7 196 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 RPRMQ9NS64 109 aa9.79□□□□□ -0.84
TNFRSF1A-202ENST00000366159 FAT2Q9NYQ8 4349 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 IGHV4-4A0A075B6R2 117 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 C7orf66A4D0T2 115 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 LYRM1O43325 122 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 MBPP02686 304 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 IL5P05113 134 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 METTL15P1P0C7V9 234 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SELENOTP62341 195 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ARL16Q0P5N6 197 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 EBLN2Q6P2I7 272 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 ZNF767PQ75MW2 155 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 SCRT1Q9BWW7 348 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 C20orf85Q9H1P6 137 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 DOK5Q9P104 306 aa9.78□□□□□ -0.84
TNFRSF1A-202ENST00000366159 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 TMEM189A5PLL7 270 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 HYPMO75409 117 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 AMBPP02760 352 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 TCRBP04435 133 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 LINC00869P0C866 280 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 S100A7P31151 101 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 OR10P1Q8NGE3 313 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 C11orf1Q9H5F2 150 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 RFNGQ9Y644 331 aa9.77□□□□□ -0.85
TNFRSF1A-202ENST00000366159 A0A087X0K7 114 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 SMCO3A2RU48 225 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 MRPS12O15235 138 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 CRXO43186 299 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 SPART-AS1P0CW21 52 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 RRAS2P62070 204 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 IGFL4Q6B9Z1 124 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 TEPPQ6URK8 271 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 UHRF2Q96PU4 802 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 GGACTQ9BVM4 153 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 GSKIPQ9P0R6 139 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 DKK2Q9UBU2 259 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 HIGD1AQ9Y241 93 aa9.76□□□□□ -0.85
TNFRSF1A-202ENST00000366159 SCGB1D2O95969 90 aa9.75□□□□□ -0.85
TNFRSF1A-202ENST00000366159 RPL7P18124 248 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-202ENST00000366159 RAP2BP61225 183 aa9.75□□□□□ -0.85
TNFRSF1A-202ENST00000366159 IL15RAQ13261 267 aa9.75□□□□□ -0.85
TNFRSF1A-202ENST00000366159 IGF2BP2-AS1Q96M15 143 aa9.75□□□□□ -0.85
TNFRSF1A-202ENST00000366159 HERC2O95714 4834 aa9.75□□□□□ -0.85
TNFRSF1A-202ENST00000366159 IGHV3OR16-12A0A075B7B8 117 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 CCSO14618 274 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 CXCL3P19876 107 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 CNN1P51911 297 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 SLC38A11Q08AI6 406 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 OXA1LQ15070 435 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 PXDC1Q5TGL8 231 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 LINC00299Q6ZSB3 139 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 RNF182Q8N6D2 247 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 OR11H7Q8NGC8 314 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 ZNF431Q8TF32 576 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 ARL6Q9H0F7 186 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 MGAT4CQ9UBM8 478 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 GOLT1BQ9Y3E0 138 aa9.74□□□□□ -0.85
TNFRSF1A-202ENST00000366159 TRAV6A0A075B6T7 132 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 AGPAT2O15120 278 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 DUSP14O95147 198 aaKnown RBP9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 OR5G3P0C626 314 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 TMEM37Q8WXS4 190 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 SEC22CQ9BRL7 303 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 CCDC32Q9BV29 185 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 ARV1Q9H2C2 271 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 NUDT15Q9NV35 164 aa9.73□□□□□ -0.85
TNFRSF1A-202ENST00000366159 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
TNFRSF1A-202ENST00000366159 HBE1P02100 147 aa9.72□□□□□ -0.85
TNFRSF1A-202ENST00000366159 EMP1P54849 157 aa9.72□□□□□ -0.85
TNFRSF1A-202ENST00000366159 ZNF546Q86UE3 836 aa9.72□□□□□ -0.85
TNFRSF1A-202ENST00000366159 MGST2Q99735 147 aa9.72□□□□□ -0.85
TNFRSF1A-202ENST00000366159 NDUFAF3Q9BU61 184 aa9.72□□□□□ -0.85
TNFRSF1A-202ENST00000366159 LOC102723971A0A1B0GUV8 181 aa9.71□□□□□ -0.86
TNFRSF1A-202ENST00000366159 M0R2Z0 102 aa9.71□□□□□ -0.86
TNFRSF1A-202ENST00000366159 FGL1Q08830 312 aa9.71□□□□□ -0.86
TNFRSF1A-202ENST00000366159 PSG3Q16557 428 aa9.71□□□□□ -0.86
TNFRSF1A-202ENST00000366159 SPINK13Q1W4C9 94 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms