RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 MRPL40Q9NQ50 206 aaKnown RBP1.17□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF492Q9P255 531 aa1.17□□□□□ -2.22
SMARCAD1-202ENST00000359052 PRG3Q9Y2Y8 225 aaPredicted RBP1.17□□□□□ -2.22
SMARCAD1-202ENST00000359052 ARL5AQ9Y689 179 aa1.17□□□□□ -2.22
SMARCAD1-202ENST00000359052 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 TRAPPC2LH3BP13 241 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 CACNA1GO43497 2377 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 TCF21O43680 179 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF737O75373 536 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF25P17030 456 aaPredicted RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 AZU1P20160 251 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 PMCHP20382 165 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 MAPK14Q16539 360 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 DGAT2L6Q6ZPD8 337 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 HORMAD1Q86X24 394 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF645Q8N7E2 425 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 PPTC7Q8NI37 304 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 SMCR5Q8TEV8 140 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 DCANP1Q8TF63 244 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 LYSMD1Q96S90 227 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 NUDT9Q9BW91 350 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 HEBP2Q9Y5Z4 205 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 PRR14LQ5THK1 2151 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 SPTBN4Q9H254 2564 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 BMPR1BO00238 502 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 APCSP02743 223 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 THBS3P49746 956 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ERFP50548 548 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 DEFA6Q01524 100 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 PEA15Q15121 130 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 SNRNP35Q16560 246 aaKnown RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 CLEC12BQ2HXU8 276 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 RASL11AQ6T310 242 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF493Q6ZR52 646 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 S100A7AQ86SG5 101 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ATPAF2Q8N5M1 289 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 DCAF4L2Q8NA75 395 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 TIMM29Q9BSF4 260 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 TRBV6-6A0A0A6YYG2 114 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 SPRR5A0A1B0GTR4 108 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 H3BMG7 143 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 SFT2D2O95562 160 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 BGLAPP02818 100 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 PRKACGP22612 351 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 CRYBB3P26998 211 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPL35P42766 123 aaKnown RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 HERV-K104P61576 105 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 MRPS10P82664 201 aaKnown RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 KPRPQ5T749 579 aaPredicted RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 Q6ZUT4 128 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR10P1Q8NGE3 313 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 OTOSQ8NHW6 89 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 PCNPQ8WW12 178 aaKnown RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ITLN1Q8WWA0 313 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 TVP23CQ96ET8 276 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 SLC35G5Q96KT7 338 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 LAMTOR2Q9Y2Q5 125 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 V9GYS6 101 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 LPAP08519 4548 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 INS-IGF2F8WCM5 200 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 IGKV1-39P01597 117 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 IGKV1D-39P04432 117 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 EVI2AP22794 236 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR1E2P47887 323 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 DYNLL1P63167 89 aaKnown RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 STX5Q13190 355 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 MMDQ15546 238 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 Q6ZN92 141 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR1N2Q8NGR9 330 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 FAM57AQ8TBR7 257 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 MRAP2Q96G30 205 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 MED10Q9BTT4 135 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 DOHHQ9BU89 302 aa1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 ZNF430Q9H8G1 570 aaPredicted RBP1.16□□□□□ -2.22
SMARCAD1-202ENST00000359052 TRAV4A0A0B4J268 109 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 LOC107984156A0A0G2JMH3 177 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 FABP5P3A8MUU1 101 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 J3QLW9 94 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 SIX6O95475 246 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 IGLV2-11P01706 119 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 DLX6P56179 175 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 AESQ08117 197 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 NEDD8Q15843 81 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 PRR15Q8IV56 129 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 ARL17AQ8IVW1 177 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 NRACQ8N912 160 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 INO80EQ8NBZ0 244 aaPredicted RBP1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 OR10D3Q8NH80 312 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 IMP4Q96G21 291 aaKnown RBP1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 C3orf18Q9UK00 162 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 SPAG17Q6Q759 2223 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 MED12Q93074 2177 aa1.15□□□□□ -2.22
SMARCAD1-202ENST00000359052 M0R233 179 aa1.15□□□□□ -2.23
SMARCAD1-202ENST00000359052 CISD3P0C7P0 127 aa1.15□□□□□ -2.23
SMARCAD1-202ENST00000359052 OR10J1P30954 320 aa1.15□□□□□ -2.23
SMARCAD1-202ENST00000359052 RPL23P62829 140 aaKnown RBP1.15□□□□□ -2.23
SMARCAD1-202ENST00000359052 MEF2BQ02080 365 aaPredicted RBP1.15□□□□□ -2.23
SMARCAD1-202ENST00000359052 BCL2L15Q5TBC7 163 aa1.15□□□□□ -2.23
SMARCAD1-202ENST00000359052 FAM104BQ5XKR9 115 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms