RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 TGFBR3LH3BV60 316 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 CELA2AP08217 269 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 CRYBA4P53673 196 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 MORN2Q502X0 79 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 LYZL1Q6UWQ5 148 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 PLXNA4Q9HCM2 1894 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 UPK2O00526 184 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 FHL1Q13642 323 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 KLF5Q13887 457 aaPredicted RBP5.03□□□□□ -1.6
VPS13B-203ENST00000358544 TMEM74BQ9NUR3 256 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 CTSBP07858 339 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 IL15RAQ13261 267 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 CFAP46Q8IYW2 2715 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 LOC102723996A0A087X1L8 192 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 G3V4G9 280 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 MAGEA5P43359 124 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 NABP1Q96AH0 204 aa5.03□□□□□ -1.6
VPS13B-203ENST00000358544 FXYD7P58549 80 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 CD69Q07108 199 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 NRN1LQ496H8 165 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 PEAR1Q5VY43 1037 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 LCNL1Q6ZST4 164 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 ASCL2Q99929 193 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 LIME1Q9H400 295 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 C15orf61A6NNL5 157 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 SAA1P0DJI8 122 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 SETXQ7Z333 2677 aaKnown RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 TRACP01848 142 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 SLC25A53Q5H9E4 307 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 TEP1Q99973 2627 aaKnown RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 IGKV1-27A0A075B6S5 117 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 PPIFP30405 207 aaKnown RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 SAA2P0DJI9 122 aaPredicted RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 CSRP1P21291 193 aaKnown RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 GUSBP11Q6P575 273 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 RNF182Q8N6D2 247 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 PLA2G2EQ9NZK7 142 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 DUTP33316 252 aaKnown RBP5.02□□□□□ -1.61
VPS13B-203ENST00000358544 TAX1BP3O14907 124 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 CRYGSP22914 178 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 SIVA1O15304 175 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 MESP2Q0VG99 397 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 ORMDL2Q53FV1 153 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 CEND1Q8N111 149 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 IGHG4P01861 327 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 PVRIGQ6DKI7 326 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 FGFBP3Q8TAT2 258 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 IGHV1-24A0A0C4DH33 117 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 IGLL5B9A064 214 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 K7EQS6 105 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 IGLC1P0CG04 106 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 ADAMTSL1Q8N6G6 1762 aa5.02□□□□□ -1.61
VPS13B-203ENST00000358544 WNT9BO14905 357 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 FOXH1O75593 365 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TCTEX1D4Q5JR98 221 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 LHX8Q68G74 356 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 Q6ZS49 121 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 ASCL5Q7RTU5 278 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 V9GYV3 84 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 IGHV3OR16-13A0A075B7E8 117 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 IGHV3-74A0A0B4J1X5 117 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TRAV17A0A0B4J275 112 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 C9orf172C9J069 976 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 FNDC10F2Z333 226 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 FOXA2Q9Y261 457 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-203ENST00000358544 SLC25A15Q9Y619 301 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TRAV21A0A0B4J279 112 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 NUPR1O60356 82 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TM4SF4P48230 202 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 RNF144BQ7Z419 303 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 SPACA3Q8IXA5 215 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 REPIN1Q9BWE0 567 aaKnown RBP5.01□□□□□ -1.61
VPS13B-203ENST00000358544 PSG8Q9UQ74 426 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TCRBV4S1A1TA0A5B7 111 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 M0R381 172 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 SRSF6Q13247 344 aaKnown RBP5.01□□□□□ -1.61
VPS13B-203ENST00000358544 A0A0G2JMZ2 1700 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 LRRC37A2A6NM11 1700 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 LRRC37AA6NMS7 1700 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 SPINK14Q6IE38 97 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 DUSP15Q9H1R2 295 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-203ENST00000358544 SP9P0CG40 484 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 HTN1P15515 57 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TMEM92Q6UXU6 159 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 FAM231DQ6ZW35 169 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 C16orf92Q96LL3 132 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TRGV9Q99603 122 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TRBV6-6A0A0A6YYG2 114 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 SRSF8Q9BRL6 282 aaKnown RBP5.01□□□□□ -1.61
VPS13B-203ENST00000358544 TRBV7-9A0A0J9YWB2 115 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 WIPF2Q8TF74 440 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-203ENST00000358544 C11orf52Q96A22 123 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 ZNF501Q96CX3 271 aaPredicted RBP5.01□□□□□ -1.61
VPS13B-203ENST00000358544 FBXL15Q9H469 300 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 SPEM2Q0P670 501 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 C5orf24Q7Z6I8 188 aa5.01□□□□□ -1.61
VPS13B-203ENST00000358544 C5orf63A6NC05 138 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 PRRG2O14669 202 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 CEACAM4O75871 244 aa5□□□□□ -1.61
VPS13B-203ENST00000358544 RNASE4P34096 147 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms