RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 LMO1P25800 156 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 RNF138Q8WVD3 245 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 NRXN2Q9P2S2 1712 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 D6R8Y8 96 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 PLA2G10O15496 165 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 RBBP6Q7Z6E9 1792 aaKnown RBP8.03□□□□□ -1.12
CHD3-202ENST00000358181 RNASE2P10153 161 aaKnown RBP8.03□□□□□ -1.12
CHD3-202ENST00000358181 C2orf68Q2NKX9 166 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 ASPHD2Q6ICH7 369 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 BPESC1Q9GZL8 116 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 C9JAW5 83 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 H0Y9J4 135 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 CA7P43166 264 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 TMEM187Q14656 261 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 MORN5Q5VZ52 161 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 ZNRF2Q8NHG8 242 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 CEP290O15078 2479 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 FBLIM1Q8WUP2 373 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 IGHV2-26A0A0B4J1V2 119 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
CHD3-202ENST00000358181 MCRIP2Q9BUT9 160 aaKnown RBP8.03□□□□□ -1.12
CHD3-202ENST00000358181 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
CHD3-202ENST00000358181 SELLP14151 372 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 TMEM30BQ3MIR4 351 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 PRSS47A8MTI9 375 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 IGKV4-1P06312 121 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 MST1LQ2TV78 715 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 RHPN1-AS1Q9BWJ2 59 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 OVOL3O00110 214 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 RHODO00212 210 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 WDYHV1Q96HA8 205 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 RAMP3O60896 148 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 EIF4EBP2Q13542 120 aaPredicted RBP8.02□□□□□ -1.13
CHD3-202ENST00000358181 C20orf204Q6ZNR8 217 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 TRIOBPQ9H2D6 2365 aa8.02□□□□□ -1.13
CHD3-202ENST00000358181 PSME4Q14997 1843 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 SH2D1AO60880 128 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 UBL5Q9BZL1 73 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 RETNQ9HD89 108 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 TRBV5-3A0A0A0MS03 114 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 ACYP1P07311 99 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 CD55P08174 381 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 Q6AWC8 147 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 ZNF837Q96EG3 531 aaPredicted RBP8.01□□□□□ -1.13
CHD3-202ENST00000358181 BRCA1P38398 1863 aaKnown RBP8.01□□□□□ -1.13
CHD3-202ENST00000358181 TRBV7-1A0A0A6YYK4 115 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 F6UB75 175 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 IRF3Q14653 427 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 C1QL4Q86Z23 238 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 GREB1Q4ZG55 1949 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 IGKV1D-43A0A0B4J1Z2 117 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 A0A1B0GW15 77 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 IGLL5B9A064 214 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 UPK2O00526 184 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 CCL18P55774 89 aa8.01□□□□□ -1.13
CHD3-202ENST00000358181 PATJQ8NI35 1801 aa8□□□□□ -1.13
CHD3-202ENST00000358181 THADAQ6YHU6 1953 aa8□□□□□ -1.13
CHD3-202ENST00000358181 IGHV1-18A0A0C4DH31 117 aa8□□□□□ -1.13
CHD3-202ENST00000358181 F2Z2F3 143 aa8□□□□□ -1.13
CHD3-202ENST00000358181 NDUFB1O75438 58 aa8□□□□□ -1.13
CHD3-202ENST00000358181 RSPO3Q9BXY4 272 aaPredicted RBP8□□□□□ -1.13
CHD3-202ENST00000358181 GNB1LQ9BYB4 327 aa8□□□□□ -1.13
CHD3-202ENST00000358181 SPINK8P0C7L1 97 aa8□□□□□ -1.13
CHD3-202ENST00000358181 CR1LQ2VPA4 569 aa8□□□□□ -1.13
CHD3-202ENST00000358181 FAM90A2PQ658T7 463 aa8□□□□□ -1.13
CHD3-202ENST00000358181 SAXO1Q8IYX7 474 aa8□□□□□ -1.13
CHD3-202ENST00000358181 SPRR3Q9UBC9 169 aa8□□□□□ -1.13
CHD3-202ENST00000358181 KLK5Q9Y337 293 aaPredicted RBP8□□□□□ -1.13
CHD3-202ENST00000358181 C17orf77Q96MU5 243 aa8□□□□□ -1.13
CHD3-202ENST00000358181 RTTNQ86VV8 2226 aa8□□□□□ -1.13
CHD3-202ENST00000358181 E9PLN8 166 aa8□□□□□ -1.13
CHD3-202ENST00000358181 FOXF2Q12947 444 aa8□□□□□ -1.13
CHD3-202ENST00000358181 C10orf55Q5SWW7 151 aa8□□□□□ -1.13
CHD3-202ENST00000358181 TMEM243Q9BU79 118 aa8□□□□□ -1.13
CHD3-202ENST00000358181 TMEM200BQ69YZ2 307 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 SEM1Q6ZVN7 128 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 NOP10Q9NPE3 64 aaKnown RBP7.99□□□□□ -1.13
CHD3-202ENST00000358181 ANK1P16157 1881 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 A0A0G2JK05 382 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 HLA-DQB1P01920 261 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 Q96M66 194 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 C5orf66Q9H5L9 145 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 ARID2Q68CP9 1835 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 LIMS1P48059 325 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 DIDO1Q9BTC0 2240 aaKnown RBP7.99□□□□□ -1.13
CHD3-202ENST00000358181 A0A1W2PR77 199 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 NEGR1Q7Z3B1 354 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.99□□□□□ -1.13
CHD3-202ENST00000358181 TMEM242Q9NWH2 141 aa7.99□□□□□ -1.13
CHD3-202ENST00000358181 WFDC11Q8NEX6 87 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 C8orf49Q96NF6 230 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 IQCF6A8MYZ5 107 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 WISP3O95389 354 aaPredicted RBP7.98□□□□□ -1.13
CHD3-202ENST00000358181 NABP1Q96AH0 204 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 VSIRQ9H7M9 311 aa7.98□□□□□ -1.13
CHD3-202ENST00000358181 TCF20Q9UGU0 1960 aaKnown RBP7.98□□□□□ -1.13
CHD3-202ENST00000358181 IGLV1-36A0A0B4J1U3 117 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms