RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
GYPC-202ENST00000356887 SOX21Q9Y651 276 aaPredicted RBP14.04□□□□□ -0.16
GYPC-202ENST00000356887 MAP1BP46821 2468 aaKnown RBP14.04□□□□□ -0.16
GYPC-202ENST00000356887 M0R2Z0 102 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 LYZP61626 148 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 EBLN2Q6P2I7 272 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 RNASEKQ6P5S7 137 aaKnown RBP14.03□□□□□ -0.16
GYPC-202ENST00000356887 ZNF738Q8NE65 137 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 OR8B3Q8NGG8 313 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 SRSF12Q8WXF0 261 aaKnown RBP14.03□□□□□ -0.16
GYPC-202ENST00000356887 OR8B2Q96RD0 313 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 GFRA4Q9GZZ7 299 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 LY6LH3BQJ8 138 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 RBP4P02753 201 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 RBPJQ06330 500 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 PMCHL1Q16048 86 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 LCN12Q6JVE5 192 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 PRSS57Q6UWY2 283 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 URB1-AS1Q96HZ7 61 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 RNF5Q99942 180 aa14.03□□□□□ -0.16
GYPC-202ENST00000356887 SLC25A39Q9BZJ4 359 aaPredicted RBP14.03□□□□□ -0.16
GYPC-202ENST00000356887 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.02□□□□□ -0.16
GYPC-202ENST00000356887 COX7A1P24310 79 aa14.02□□□□□ -0.16
GYPC-202ENST00000356887 BATFQ16520 125 aa14.02□□□□□ -0.16
GYPC-202ENST00000356887 RPEQ96AT9 228 aa14.02□□□□□ -0.16
GYPC-202ENST00000356887 DAZAP1Q96EP5 407 aaKnown RBP14.02□□□□□ -0.16
GYPC-202ENST00000356887 PGLYRP4Q96LB8 373 aa14.02□□□□□ -0.16
GYPC-202ENST00000356887 TRAV30A0A087WSZ9 112 aa14.02□□□□□ -0.17
GYPC-202ENST00000356887 PPIAL4CA0A0B4J2A2 164 aa14.02□□□□□ -0.17
GYPC-202ENST00000356887 NPIPB6E9PJ23 425 aa14.02□□□□□ -0.17
GYPC-202ENST00000356887 PPIAL4GP0DN37 164 aa14.02□□□□□ -0.17
GYPC-202ENST00000356887 KLHDC1Q8N7A1 406 aa14.02□□□□□ -0.17
GYPC-202ENST00000356887 FAM231BA6NCW3 169 aa14.01□□□□□ -0.17
GYPC-202ENST00000356887 C2orf70A6NJV1 201 aa14.01□□□□□ -0.17
GYPC-202ENST00000356887 NDUFB8O95169 186 aa14.01□□□□□ -0.17
GYPC-202ENST00000356887 IGLV2-11P01706 119 aa14.01□□□□□ -0.17
GYPC-202ENST00000356887 HOXB4P17483 251 aaPredicted RBP14.01□□□□□ -0.17
GYPC-202ENST00000356887 FAM162BQ5T6X4 162 aa14.01□□□□□ -0.17
GYPC-202ENST00000356887 RBPMS2Q6ZRY4 209 aaKnown RBP14.01□□□□□ -0.17
GYPC-202ENST00000356887 Q86TA4 180 aa14.01□□□□□ -0.17
GYPC-202ENST00000356887 ATOH7Q8N100 152 aa14.01□□□□□ -0.17
GYPC-202ENST00000356887 SRSF8Q9BRL6 282 aaKnown RBP14.01□□□□□ -0.17
GYPC-202ENST00000356887 IGKV1-17P01599 117 aa14□□□□□ -0.17
GYPC-202ENST00000356887 PRR31Q5SQ13 230 aa14□□□□□ -0.17
GYPC-202ENST00000356887 TRBV6-1A0A0K0K1D8 114 aa14□□□□□ -0.17
GYPC-202ENST00000356887 K7ERU9 68 aa14□□□□□ -0.17
GYPC-202ENST00000356887 OCIAD2Q56VL3 154 aa14□□□□□ -0.17
GYPC-202ENST00000356887 Q6ZN92 141 aa14□□□□□ -0.17
GYPC-202ENST00000356887 EXOC3-AS1Q8N2X6 119 aa14□□□□□ -0.17
GYPC-202ENST00000356887 OR4C5Q8NGB2 326 aa14□□□□□ -0.17
GYPC-202ENST00000356887 RASL11BQ9BPW5 248 aa14□□□□□ -0.17
GYPC-202ENST00000356887 COX11Q9Y6N1 276 aa14□□□□□ -0.17
GYPC-202ENST00000356887 TRAV8-1A0A0A6YYK1 113 aa13.99□□□□□ -0.17
GYPC-202ENST00000356887 CIARTQ8N365 385 aaPredicted RBP13.99□□□□□ -0.17
GYPC-202ENST00000356887 TXN2Q99757 166 aa13.99□□□□□ -0.17
GYPC-202ENST00000356887 VKORC1Q9BQB6 163 aa13.99□□□□□ -0.17
GYPC-202ENST00000356887 ZZEF1O43149 2961 aa13.99□□□□□ -0.17
GYPC-202ENST00000356887 TRAV9-2A0A087WT02 112 aa13.99□□□□□ -0.17
GYPC-202ENST00000356887 KIR3DL3Q8N743 410 aa13.99□□□□□ -0.17
GYPC-202ENST00000356887 TLN1Q9Y490 2541 aaKnown RBP13.98□□□□□ -0.17
GYPC-202ENST00000356887 K7EIM0 57 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 CD24P25063 80 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 HNRNPA3P51991 378 aaKnown RBP13.98□□□□□ -0.17
GYPC-202ENST00000356887 PLGLAQ15195 96 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 Q56UQ5 140 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 LDLRAD2Q5SZI1 272 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 FAM120AOSQ5T036 256 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 GOLT1AQ6ZVE7 132 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 PRNTQ86SH4 94 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 LINC01560Q8TB33 94 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 SHANK2-AS3Q9BTD1 123 aa13.98□□□□□ -0.17
GYPC-202ENST00000356887 ZNF785A8K8V0 405 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 FOXA3P55318 350 aaPredicted RBP13.97□□□□□ -0.17
GYPC-202ENST00000356887 FBLN7Q53RD9 439 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 MUC15Q8N387 334 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 LY6G5BQ8NDX9 201 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 CLUHP3Q96NS8 147 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 OVOL3O00110 214 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 TIMM23O14925 209 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 CNIH1O95406 144 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 APOHP02749 345 aaPredicted RBP13.97□□□□□ -0.17
GYPC-202ENST00000356887 COL8A1P27658 744 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 TFPI2P48307 235 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 Q71RC1 249 aaPredicted RBP13.97□□□□□ -0.17
GYPC-202ENST00000356887 SPATA12Q7Z6I5 190 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 TMEM190Q8WZ59 177 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 CHCHD1Q96BP2 118 aaKnown RBP13.97□□□□□ -0.17
GYPC-202ENST00000356887 NDFIP1Q9BT67 221 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 LAMTOR2Q9Y2Q5 125 aa13.97□□□□□ -0.17
GYPC-202ENST00000356887 POLEQ07864 2286 aa13.96□□□□□ -0.17
GYPC-202ENST00000356887 TRBV19A0A075B6N1 114 aa13.96□□□□□ -0.17
GYPC-202ENST00000356887 LOC102724200A0A096LPH7 203 aaPredicted RBP13.96□□□□□ -0.17
GYPC-202ENST00000356887 HAX1O00165 279 aa13.96□□□□□ -0.17
GYPC-202ENST00000356887 RHOGP84095 191 aa13.96□□□□□ -0.17
GYPC-202ENST00000356887 CLEC5AQ9NY25 188 aa13.96□□□□□ -0.17
GYPC-202ENST00000356887 SH2D7A6NKC9 451 aaPredicted RBP13.95□□□□□ -0.18
GYPC-202ENST00000356887 H3BRN7 92 aa13.95□□□□□ -0.18
GYPC-202ENST00000356887 M0QZ24 198 aa13.95□□□□□ -0.18
GYPC-202ENST00000356887 ZNF672Q499Z4 452 aaPredicted RBP13.95□□□□□ -0.18
GYPC-202ENST00000356887 STPG4Q8N801 248 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms