RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CD81P60033 236 aa13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 RPL7L1Q6DKI1 246 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 SIGLEC15Q6ZMC9 328 aa13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 LINC00305Q7Z4B0 112 aa13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 HSD17B11Q8NBQ5 300 aa13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 SHANK2-AS3Q9BTD1 123 aa13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 WFDC10AQ9H1F0 79 aa13.38□□□□□ -0.27
PDLIM7-202ENST00000355841 C10orf113Q5VZT2 155 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 GTSCR1Q86UQ5 136 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 Q8N1Y9 231 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 LRRC20Q8TCA0 184 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 SLC25A32Q9H2D1 315 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 DNAJC4Q9NNZ3 241 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 DNASE2O00115 360 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 ZNF266Q14584 549 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 PARD6GQ9BYG4 376 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-202ENST00000355841 ELOA3CA0A087WX78 387 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-202ENST00000355841 HELTA6NFD8 242 aa13.36□□□□□ -0.27
PDLIM7-202ENST00000355841 C17orf112F2Z3M2 114 aa13.36□□□□□ -0.27
PDLIM7-202ENST00000355841 CD5P06127 495 aa13.36□□□□□ -0.27
PDLIM7-202ENST00000355841 DEFB121Q5J5C9 76 aa13.36□□□□□ -0.27
PDLIM7-202ENST00000355841 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
PDLIM7-202ENST00000355841 FAM24BQ8N5W8 94 aa13.36□□□□□ -0.27
PDLIM7-202ENST00000355841 TRAV5A0A0B4J249 113 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 PAFAH1B2P68402 229 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 FFAR4Q5NUL3 377 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 TMUB2Q71RG4 321 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 KCNRGQ8N5I3 272 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 SH3BGRL3Q9H299 93 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 SMAD5-AS1Q9Y6J3 95 aa13.35□□□□□ -0.27
PDLIM7-202ENST00000355841 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 SNRPCP09234 159 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 OR1L4Q8NGR5 311 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 CYTL1Q9NRR1 136 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 ATP6V0CP27449 155 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 ZNF345Q14585 488 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 ODF3L2Q3SX64 289 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 SPATA31B1PQ5VZV4 182 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 DCANP1Q8TF63 244 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 PFDN5Q99471 154 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 SEPSECSQ9HD40 501 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 KCNIP2Q9NS61 270 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
PDLIM7-202ENST00000355841 BORCS7-ASMTA0A0B4J1R7 106 aa13.33□□□□□ -0.28
PDLIM7-202ENST00000355841 GATAD1Q8WUU5 269 aa13.33□□□□□ -0.28
PDLIM7-202ENST00000355841 C17orf77Q96MU5 243 aa13.33□□□□□ -0.28
PDLIM7-202ENST00000355841 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
PDLIM7-202ENST00000355841 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 K7EQG2 157 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 TAAR5O14804 337 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 S100A7P31151 101 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 ZNF124Q15973 351 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 FAM78BQ5VT40 261 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 S100A7AQ86SG5 101 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 SLC51BQ86UW2 128 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 ARPC5LQ9BPX5 153 aa13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
PDLIM7-202ENST00000355841 PRKDCP78527 4128 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 A0A0D9SG52 128 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 ZNF688P0C7X2 276 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 IGHV4-30-4P0DP06 118 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 GALR1P47211 349 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 MIR17HGQ75NE6 70 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 APRG1Q8IVJ8 170 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 NMBP08949 121 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 RPL7P18124 248 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 RAB2AP61019 212 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 TIMM9Q9Y5J7 89 aa13.31□□□□□ -0.28
PDLIM7-202ENST00000355841 H3BTX0 84 aa13.3□□□□□ -0.28
PDLIM7-202ENST00000355841 MRPS12O15235 138 aaKnown RBP13.3□□□□□ -0.28
PDLIM7-202ENST00000355841 JTBO76095 146 aa13.3□□□□□ -0.28
PDLIM7-202ENST00000355841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.3□□□□□ -0.28
PDLIM7-202ENST00000355841 MAP6D1Q9H9H5 199 aa13.3□□□□□ -0.28
PDLIM7-202ENST00000355841 TRAV2A0A0B4J234 112 aa13.29□□□□□ -0.28
PDLIM7-202ENST00000355841 KANTRA0A1W2PQU2 76 aa13.29□□□□□ -0.28
PDLIM7-202ENST00000355841 BCL2L11O43521 198 aa13.29□□□□□ -0.28
PDLIM7-202ENST00000355841 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
PDLIM7-202ENST00000355841 DEFB131AP59861 70 aa13.29□□□□□ -0.28
PDLIM7-202ENST00000355841 IGFL4Q6B9Z1 124 aa13.29□□□□□ -0.28
PDLIM7-202ENST00000355841 GPR82Q96P67 336 aa13.29□□□□□ -0.28
PDLIM7-202ENST00000355841 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 SOCS3O14543 225 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 PSMG4Q5JS54 123 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 BPIFA4PQ86YQ2 179 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 EIF4E3Q8N5X7 224 aaKnown RBP13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 PSMG3Q9BT73 122 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 ZNF471Q9BX82 626 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 SLC25A2Q9BXI2 301 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 TUBA4BQ9H853 241 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 SRD5A3Q9H8P0 318 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 PYYP10082 97 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 ACOT6Q3I5F7 207 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 OR2G3Q8NGZ4 309 aa13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 GNPNAT1Q96EK6 184 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-202ENST00000355841 LINC00052Q96N35 136 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms