RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TEX50A0A1B0GTY4 177 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 LOC285095A0A1B0GVY8 99 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF736B4DX44 427 aaPredicted RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 UMAD1C9J7I0 102 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 F6UZH7 168 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 G3V3Q6 166 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 H3BSH0 61 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 LHBP01229 141 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 C1GALT1C1LP0DN25 315 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR12D1P0DN82 309 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 NPY1RP25929 384 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 CNTFRP26992 372 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SSR2P43308 183 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PSMD8P48556 350 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 MARCKSL1P49006 195 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 GZMMP51124 257 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 WNT4P56705 351 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 H2BFSP57053 126 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PIGPP57054 158 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR4D2P58180 307 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PKIAP61925 76 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PSPHP78330 225 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 FABP5Q01469 135 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF90Q03938 601 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 HTR4Q13639 388 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 APOFQ13790 326 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 NANOGP8Q6NSW7 305 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SLC25A34Q6PIV7 304 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 TCF24Q7RTU0 167 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 LRRC28Q86X40 367 aaPredicted RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ACBD7Q8N6N7 88 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR5A2Q8NGI9 324 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR10X1Q8NGY0 326 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SLC7A6Q92536 515 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SDHCQ99643 169 aaPredicted RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PRRT1Q99946 306 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 TTTY13Q9BZ97 58 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 INIPQ9NRY2 104 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR5V1Q9UGF6 321 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 RFNGQ9Y644 331 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 COL12A1Q99715 3063 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 HIVEP3Q5T1R4 2406 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 DYNC1H1Q14204 4646 aaKnown RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SLX4Q8IY92 1834 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 NOTCH3Q9UM47 2321 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 UTP20O75691 2785 aaKnown RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 MYH10P35580 1976 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 hCG_1818297A0A087WSY0 165 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 IGHV3-43A0A0B4J1X8 118 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 LCE6AA0A183 80 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR5H14A6NHG9 310 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 CD300LBA8K4G0 201 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 H3BMM0 161 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SLC17A3O00476 420 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 FAAHO00519 579 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PIRO00625 290 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 BET1O15155 118 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR2J2O76002 312 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR10J4P0C629 311 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ALOX5APP20292 161 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 DAD1P61803 113 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 CCL7P80098 99 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 CDK6Q00534 326 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 HES1Q14469 280 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 EBPQ15125 230 aaKnown RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 CLEC12BQ2HXU8 276 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SBSNQ6UWP8 590 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 LINC00299Q6ZSB3 139 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 AMN1Q8IY45 258 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 DEFB106AQ8N104 65 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR52R1Q8NGF1 315 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR13C4Q8NGS5 318 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR52N1Q8NH53 320 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 LHFPL5Q8TAF8 219 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 GNPDA2Q8TDQ7 276 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SFT2D1Q8WV19 159 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 UBE2WQ96B02 151 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 TVP23CQ96ET8 276 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SLC35G5Q96KT7 338 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 EFCAB11Q9BUY7 163 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ULBP3Q9BZM4 244 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 MRPS16Q9Y3D3 137 aaKnown RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SMAD5-AS1Q9Y6J3 95 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 THADAQ6YHU6 1953 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 NBEAL1Q6ZS30 2694 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 CPDO75976 1380 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 RFX7Q2KHR2 1363 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 MEIS3P1A6NDR6 274 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR4C45A6NMZ5 311 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 CEBPZOSA8MTT3 80 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF727A8MUV8 499 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 A8MWL6 223 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SLC37A4O43826 429 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PDE6DO43924 150 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 S100A7P31151 101 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 TCTAP57738 103 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 POLR2GP62487 172 aaKnown RBP eCLIP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 RPS24P62847 133 aaKnown RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 EMX1Q04741 257 aaPredicted RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ACOT6Q3I5F7 207 aaPredicted RBP0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms