RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MEGF9Q9H1U4 602 aa13.07□□□□□ -0.32
SAMM50-201ENST00000350028 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-201ENST00000350028 TACC2O95359 2948 aa13.06□□□□□ -0.32
SAMM50-201ENST00000350028 LTAP01374 205 aa13.06□□□□□ -0.32
SAMM50-201ENST00000350028 CTSGP08311 255 aa13.06□□□□□ -0.32
SAMM50-201ENST00000350028 CBLN1P23435 193 aa13.06□□□□□ -0.32
SAMM50-201ENST00000350028 S100A7P31151 101 aa13.06□□□□□ -0.32
SAMM50-201ENST00000350028 IER3P46695 156 aa13.06□□□□□ -0.32
SAMM50-201ENST00000350028 PYY3Q5JQD4 70 aa13.06□□□□□ -0.32
SAMM50-201ENST00000350028 IGHV4-30-2A0A087WSY4 118 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 ZNF414Q96IQ9 312 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 PACRGQ96M98 296 aaPredicted RBP13.05□□□□□ -0.32
SAMM50-201ENST00000350028 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 MOB4Q9Y3A3 225 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 OR2T8A6NH00 312 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 SNURFLB1AK76 121 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 IGHV3-23P01764 117 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 AMBPP02760 352 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 TCL1AP56279 114 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 EXOC3-AS1Q8N2X6 119 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 ZNF502Q8TBZ5 544 aa13.05□□□□□ -0.32
SAMM50-201ENST00000350028 ABCA1O95477 2261 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 IGHV3OR16-10A0A075B7F0 116 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 TRAV40A0A0B4J280 105 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 AMY1AP04745 511 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 PAX1P15863 534 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 PDE6HQ13956 83 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 DNLZQ5SXM8 178 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 PRR27Q6MZM9 219 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
SAMM50-201ENST00000350028 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 MSMBP08118 114 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 RHOGP84095 191 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 RASL11AQ6T310 242 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 TMEM136Q6ZRR5 245 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 TSKUQ8WUA8 353 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 TMEM18Q96B42 140 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 RABAC1Q9UI14 185 aa13.03□□□□□ -0.32
SAMM50-201ENST00000350028 J3QKU1 62 aa13.02□□□□□ -0.32
SAMM50-201ENST00000350028 K7EQM0 130 aa13.02□□□□□ -0.32
SAMM50-201ENST00000350028 RPL7P18124 248 aaKnown RBP13.02□□□□□ -0.32
SAMM50-201ENST00000350028 C15orf32Q32M92 178 aa13.02□□□□□ -0.32
SAMM50-201ENST00000350028 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.32
SAMM50-201ENST00000350028 Q86TA4 180 aa13.02□□□□□ -0.32
SAMM50-201ENST00000350028 PIFOQ8TCI5 191 aa13.02□□□□□ -0.32
SAMM50-201ENST00000350028 NAT8BQ9UHF3 227 aa13.02□□□□□ -0.32
SAMM50-201ENST00000350028 MED13LQ71F56 2210 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 FBN2P35556 2912 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 C19orf71A6NCJ1 209 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 SPINK4O60575 86 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-201ENST00000350028 HLA-DQA1P01909 254 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 FRMD6-AS1P0C7T7 363 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 CRIP2P52943 208 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-201ENST00000350028 CT83Q5H943 113 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 BRD3OSQ6XYD6 125 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 BCL6BQ8N143 479 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-201ENST00000350028 GBGT1Q8N5D6 347 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 WIPF2Q8TF74 440 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-201ENST00000350028 PRSS22Q9GZN4 317 aa13.02□□□□□ -0.33
SAMM50-201ENST00000350028 ZNF331Q9NQX6 463 aaPredicted RBP13.02□□□□□ -0.33
SAMM50-201ENST00000350028 CENPEQ02224 2701 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 G3V318 75 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 BMPR1BO00238 502 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 IGLV2-11P01706 119 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 CRISP2P16562 243 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 PSG9Q00887 426 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 EEF1AKMT3Q96AZ1 226 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 DAZAP1Q96EP5 407 aaKnown RBP13.01□□□□□ -0.33
SAMM50-201ENST00000350028 RPP21Q9H633 154 aaKnown RBP13.01□□□□□ -0.33
SAMM50-201ENST00000350028 AAMDCQ9H7C9 122 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 GSN-AS1Q9NRJ2 163 aa13.01□□□□□ -0.33
SAMM50-201ENST00000350028 SH2D7A6NKC9 451 aaPredicted RBP13□□□□□ -0.33
SAMM50-201ENST00000350028 B4DSR2 109 aa13□□□□□ -0.33
SAMM50-201ENST00000350028 COX6B1P14854 86 aa13□□□□□ -0.33
SAMM50-201ENST00000350028 SLC25A16P16260 332 aa13□□□□□ -0.33
SAMM50-201ENST00000350028 SLC35B1P78383 322 aa13□□□□□ -0.33
SAMM50-201ENST00000350028 MRPL54Q6P161 138 aaKnown RBP13□□□□□ -0.33
SAMM50-201ENST00000350028 TMEM219Q86XT9 240 aa13□□□□□ -0.33
SAMM50-201ENST00000350028 ARL6IP6Q8N6S5 226 aa13□□□□□ -0.33
SAMM50-201ENST00000350028 ZFP30Q9Y2G7 519 aa13□□□□□ -0.33
SAMM50-201ENST00000350028 TRBV7-1A0A0A6YYK4 115 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 A1L4Q6 167 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 A8MWL6 223 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 P01737 135 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 IGHV4-38-2P0DP08 117 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 GPR183P32249 361 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 Q0VG73 95 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 ATP6V0BQ99437 205 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 NBPF19A0A087WUL8 3843 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 TRAV41A0A0B4J266 112 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 TRAV20A0A0B4J274 112 aa12.99□□□□□ -0.33
SAMM50-201ENST00000350028 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms