RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 DEFB130BP0DP73 79 aa11.64□□□□□ -0.55
TRIM25-201ENST00000316881 DEFB130AP0DP74 79 aa11.64□□□□□ -0.55
TRIM25-201ENST00000316881 CTAG1AP78358 180 aa11.64□□□□□ -0.55
TRIM25-201ENST00000316881 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
TRIM25-201ENST00000316881 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
TRIM25-201ENST00000316881 PTPRDP23468 1912 aa11.64□□□□□ -0.55
TRIM25-201ENST00000316881 NLRC5Q86WI3 1866 aa11.64□□□□□ -0.55
TRIM25-201ENST00000316881 ZNF562Q6V9R5 426 aa11.64□□□□□ -0.55
TRIM25-201ENST00000316881 TRAV3A0A0B4J244 114 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 IGHV2-70DA0A0C4DH43 119 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BKO60814 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BJP06899 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BOP23527 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BBP33778 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BDP58876 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 DEFB131AP59861 70 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BCP62807 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST2H2BEQ16778 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.63□□□□□ -0.55
TRIM25-201ENST00000316881 C10orf126Q8N4M7 172 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BHQ93079 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BNQ99877 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 HIST1H2BMQ99879 126 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 LHFPL4Q7Z7J7 247 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 C14orf144Q96I85 54 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 TCRAP04437 139 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 LINC01559Q495D7 138 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 DIDO1Q9BTC0 2240 aaKnown RBP11.63□□□□□ -0.55
TRIM25-201ENST00000316881 TMEM170AQ8WVE7 144 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 COL4A6Q14031 1691 aa11.63□□□□□ -0.55
TRIM25-201ENST00000316881 ITGB1BP1O14713 200 aa11.62□□□□□ -0.55
TRIM25-201ENST00000316881 LAGE3Q14657 143 aa11.62□□□□□ -0.55
TRIM25-201ENST00000316881 FAM110DQ8TAY7 271 aaPredicted RBP11.62□□□□□ -0.55
TRIM25-201ENST00000316881 Q8TCH9 128 aa11.62□□□□□ -0.55
TRIM25-201ENST00000316881 TCF20Q9UGU0 1960 aaKnown RBP11.62□□□□□ -0.55
TRIM25-201ENST00000316881 PAX2Q02962 417 aa11.62□□□□□ -0.55
TRIM25-201ENST00000316881 GPR179Q6PRD1 2367 aa11.62□□□□□ -0.55
TRIM25-201ENST00000316881 SRSF4Q08170 494 aaKnown RBP11.62□□□□□ -0.55
TRIM25-201ENST00000316881 POLEQ07864 2286 aa11.62□□□□□ -0.55
TRIM25-201ENST00000316881 TRAV2A0A0B4J234 112 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 VCYO14598 125 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 LINC00473A8K010 186 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 TEX43Q6ZNM6 134 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 Q71RC1 249 aaPredicted RBP11.61□□□□□ -0.55
TRIM25-201ENST00000316881 RASL10AQ92737 203 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 A0A1B0GWB2 263 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 IGKV1-5P01602 117 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 ERCC8Q13216 396 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 RPRMLQ8N4K4 120 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 GATA4P43694 442 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 PSG3Q16557 428 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 MGST2Q99735 147 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 C11orf68Q9H3H3 251 aaKnown RBP11.61□□□□□ -0.55
TRIM25-201ENST00000316881 CDK2AP2O75956 126 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 DAD1P61803 113 aa11.61□□□□□ -0.55
TRIM25-201ENST00000316881 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
TRIM25-201ENST00000316881 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 SERF1AO75920 110 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 IGKCP01834 107 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 ADMP35318 185 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 CFHR2P36980 270 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 PIP4P1Q86T03 277 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 ATP6V0E1O15342 81 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 CXCL1P09341 107 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 APOC4P55056 127 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 TMEM249Q2WGJ8 235 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 ST6GALNAC6Q969X2 333 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 SMPXQ9UHP9 88 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 C6orf226Q5I0X4 101 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 ZNF581Q9P0T4 197 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 SS18Q15532 418 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 SPATA31B1PQ5VZV4 182 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 IFI27L1Q96BM0 104 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 SLC25A2Q9BXI2 301 aa11.6□□□□□ -0.55
TRIM25-201ENST00000316881 LY6G6EA0A0G2JKS1 128 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 PGPEP1LA6NFU8 196 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 U3KQA8 63 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 FAM90A2PQ658T7 463 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 Q6ZS49 121 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 C5orf24Q7Z6I8 188 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 GGTLC3B5MD39 225 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 A0A1B0GW64 132 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 TYMSP04818 313 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 OR2K2Q8NGT1 345 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 C1orf159Q96HA4 380 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 F5H768 121 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 EREGO14944 169 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 CD300EQ496F6 205 aaPredicted RBP11.59□□□□□ -0.55
TRIM25-201ENST00000316881 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
TRIM25-201ENST00000316881 PAX4O43316 350 aa11.58□□□□□ -0.56
TRIM25-201ENST00000316881 SH2D1AO60880 128 aa11.58□□□□□ -0.56
TRIM25-201ENST00000316881 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
TRIM25-201ENST00000316881 MST1LQ2TV78 715 aa11.58□□□□□ -0.56
TRIM25-201ENST00000316881 PLEKHB2Q96CS7 222 aa11.58□□□□□ -0.56
TRIM25-201ENST00000316881 PRB4P10163 310 aaPredicted RBP11.58□□□□□ -0.56
TRIM25-201ENST00000316881 Q8TAT8 98 aa11.58□□□□□ -0.56
TRIM25-201ENST00000316881 F8WEM9 126 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms