RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SLC25A22Q9H936 323 aa14.28□□□□□ -0.12
PDZRN3-202ENST00000308537 CELA1Q9UNI1 258 aa14.28□□□□□ -0.12
PDZRN3-202ENST00000308537 ZNF705FA8MVS1 300 aaPredicted RBP14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 ZNF705DP0CH99 300 aaPredicted RBP14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 ZNF705BP0CI00 300 aaPredicted RBP14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 NRARPQ7Z6K4 114 aa14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 OR1B1Q8NGR6 318 aa14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 SHANK2-AS3Q9BTD1 123 aa14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 RSG1Q9BU20 258 aa14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 DOK5Q9P104 306 aa14.27□□□□□ -0.13
PDZRN3-202ENST00000308537 A0A0J9YX75 114 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 SMCO3A2RU48 225 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 INMT-MINDY4F8WBC2 141 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 L7N2F9 121 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 MRPS12O15235 138 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 LY6G6CO95867 125 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 ID1P41134 155 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 VAMP2P63027 116 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 IFITM3Q01628 133 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 AMTNQ6UX39 209 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 C2orf50Q96LR7 162 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 TMEM147Q9BVK8 224 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 C1QTNF4Q9BXJ3 329 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 NPVFQ9HCQ7 196 aa14.26□□□□□ -0.13
PDZRN3-202ENST00000308537 IGKV3-20P01619 116 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 LINC00869P0C866 280 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 PVALBP20472 110 aaPredicted RBP14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 HLA-DMBP28068 263 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 GALR1P47211 349 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 MEOX2P50222 304 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 NUTF2P61970 127 aaKnown RBP14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 SLC38A11Q08AI6 406 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 OR10P1Q8NGE3 313 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 UHRF2Q96PU4 802 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 NEU1Q99519 415 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 SLC35B3Q9H1N7 401 aa14.25□□□□□ -0.13
PDZRN3-202ENST00000308537 DEDDO75618 318 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 S100A7P31151 101 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 FXYD7P58549 80 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 SELENOTP62341 195 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 FAM78BQ5VT40 261 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 IGFL4Q6B9Z1 124 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 Q6ZTC4 211 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 GPR82Q96P67 336 aa14.24□□□□□ -0.13
PDZRN3-202ENST00000308537 SAMD13Q5VXD3 122 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 SPATA31B1PQ5VZV4 182 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 LGALS9CQ6DKI2 356 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 TEPPQ6URK8 271 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 C16orf92Q96LL3 132 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 MGST2Q99735 147 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 MARVELD1Q9BSK0 173 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 GGACTQ9BVM4 153 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 APLNQ9ULZ1 77 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 HIGD1AQ9Y241 93 aa14.23□□□□□ -0.13
PDZRN3-202ENST00000308537 HYPMO75409 117 aa14.22□□□□□ -0.13
PDZRN3-202ENST00000308537 C12orf74Q32Q52 190 aa14.22□□□□□ -0.13
PDZRN3-202ENST00000308537 C1orf158Q8N1D5 194 aa14.22□□□□□ -0.13
PDZRN3-202ENST00000308537 OR4B1Q8NGF8 309 aa14.22□□□□□ -0.13
PDZRN3-202ENST00000308537 LSM5Q9Y4Y9 91 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-202ENST00000308537 A0A087X0K7 114 aa14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 AGPAT2O15120 278 aa14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 CYCSP99999 105 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 RPP25LQ8N5L8 163 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 RNF182Q8N6D2 247 aa14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 C2CD4CQ8TF44 421 aa14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 ARV1Q9H2C2 271 aa14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 RPRMQ9NS64 109 aa14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 MGAT4CQ9UBM8 478 aa14.21□□□□□ -0.13
PDZRN3-202ENST00000308537 FAM24AA6NFZ4 105 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 C11orf94C9JXX5 98 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 RPL7P18124 248 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 BCAP31P51572 246 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 RAP2BP61225 183 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 PRR20EP86478 221 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 PRR20CP86479 221 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 PRR20DP86480 221 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 PRR20BP86481 221 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 PRR20AP86496 221 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 PSG9Q00887 426 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 MORN5Q5VZ52 161 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 TMEM37Q8WXS4 190 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 ARL6Q9H0F7 186 aa14.2□□□□□ -0.14
PDZRN3-202ENST00000308537 CRXO43186 299 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-202ENST00000308537 RLN2P04090 185 aa14.19□□□□□ -0.14
PDZRN3-202ENST00000308537 OR5G3P0C626 314 aa14.19□□□□□ -0.14
PDZRN3-202ENST00000308537 S100A10P60903 97 aa14.19□□□□□ -0.14
PDZRN3-202ENST00000308537 VWC2Q2TAL6 325 aa14.19□□□□□ -0.14
PDZRN3-202ENST00000308537 EBLN2Q6P2I7 272 aa14.19□□□□□ -0.14
PDZRN3-202ENST00000308537 ZNF767PQ75MW2 155 aa14.19□□□□□ -0.14
PDZRN3-202ENST00000308537 SSNA1O43805 119 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 CST7O76096 145 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 CXCL3P19876 107 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 CAV2P51636 162 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 CNN1P51911 297 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 TCTAP57738 103 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 RAB32Q13637 225 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 S100A7AQ86SG5 101 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 ZNF546Q86UE3 836 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 OR11H7Q8NGC8 314 aa14.18□□□□□ -0.14
PDZRN3-202ENST00000308537 LYRM2Q9NU23 88 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms