RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 LTAP01374 205 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 HTR1DP28221 377 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
SSH3-201ENST00000308127 RASL11AQ6T310 242 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
SSH3-201ENST00000308127 LOC105371242A0A075B767 164 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 C19orf71A6NCJ1 209 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 C16orf97H3BN30 126 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 TOMM40O96008 361 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 RELQ04864 619 aaPredicted RBP13.19□□□□□ -0.3
SSH3-201ENST00000308127 C22orf15Q8WYQ4 148 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 CBY1Q9Y3M2 126 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 CELSR1Q9NYQ6 3014 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 OR2T8A6NH00 312 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 RBPMS2Q6ZRY4 209 aaKnown RBP13.19□□□□□ -0.3
SSH3-201ENST00000308127 Q86TA4 180 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 MUC15Q8N387 334 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 KLF12Q9Y4X4 402 aa13.19□□□□□ -0.3
SSH3-201ENST00000308127 UBE2V1Q13404 147 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 IGHV3OR16-8A0A075B7F1 116 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 ZNF785A8K8V0 405 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 LY6HO94772 140 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 NCR2O95944 276 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 OR4C5Q8NGB2 326 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 ORAOV1Q8WV07 137 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 SLC25A39Q9BZJ4 359 aaPredicted RBP13.18□□□□□ -0.3
SSH3-201ENST00000308127 INSIG2Q9Y5U4 225 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 PIP4P1Q86T03 277 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 TMEM116Q8NCL8 245 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 SIGLEC9Q9Y336 463 aa13.18□□□□□ -0.3
SSH3-201ENST00000308127 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
SSH3-201ENST00000308127 LOXL1Q08397 574 aaPredicted RBP13.17□□□□□ -0.3
SSH3-201ENST00000308127 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
SSH3-201ENST00000308127 FMC1Q96HJ9 113 aa13.17□□□□□ -0.3
SSH3-201ENST00000308127 COL6A6A6NMZ7 2263 aa13.17□□□□□ -0.3
SSH3-201ENST00000308127 C8orf46Q8TAG6 207 aa13.17□□□□□ -0.3
SSH3-201ENST00000308127 TRGV9Q99603 122 aa13.17□□□□□ -0.3
SSH3-201ENST00000308127 IGHV1-69-2A0A0G2JMI3 117 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 IGLV2-11P01706 119 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 CRYABP02511 175 aaKnown RBP13.16□□□□□ -0.3
SSH3-201ENST00000308127 CRYGCP07315 174 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 DLX6P56179 175 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 Q6ZS92 163 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 STXBP6Q8NFX7 210 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 TMEM133Q9H2Q1 129 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
SSH3-201ENST00000308127 HRNRQ86YZ3 2850 aaPredicted RBP13.16□□□□□ -0.3
SSH3-201ENST00000308127 IGF2RP11717 2491 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 CNIH1O95406 144 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 IGHV3-23P01764 117 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 APOHP02749 345 aaPredicted RBP13.16□□□□□ -0.3
SSH3-201ENST00000308127 PRR30Q53SZ7 412 aaPredicted RBP13.16□□□□□ -0.3
SSH3-201ENST00000308127 IGFL4Q6B9Z1 124 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 RNASE6Q93091 150 aaKnown RBP13.16□□□□□ -0.3
SSH3-201ENST00000308127 C8orf49Q96NF6 230 aa13.16□□□□□ -0.3
SSH3-201ENST00000308127 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.15□□□□□ -0.3
SSH3-201ENST00000308127 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 PPP1R27Q86WC6 154 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 WFDC3Q8IUB2 231 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 NUP37Q8NFH4 326 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 NAA38Q9BRA0 125 aaKnown RBP13.15□□□□□ -0.3
SSH3-201ENST00000308127 MUC6Q6W4X9 2439 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 TEX22C9J3V5 150 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 CEACAM4O75871 244 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 FAM57AQ8TBR7 257 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 HILPDAQ9Y5L2 63 aa13.15□□□□□ -0.3
SSH3-201ENST00000308127 IGHV3-35A0A0C4DH35 117 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 INS-IGF2F8WCM5 200 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 ETFRF1Q6IPR1 90 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 SLC25A34Q6PIV7 304 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 OR8A1Q8NGG7 326 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 UQCRFS1P47985 274 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 RBX1P62877 108 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 F11RQ9Y624 299 aaKnown RBP13.14□□□□□ -0.31
SSH3-201ENST00000308127 E7EQL1 145 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 IGKV1-17P01599 117 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 MC5RP33032 325 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 TMEM30BQ3MIR4 351 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 LDLRAD2Q5SZI1 272 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
SSH3-201ENST00000308127 TMEM213A2RRL7 107 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 CRIP1P50238 77 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 PPP1R14DQ9NXH3 145 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 TAX1BP3O14907 124 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
SSH3-201ENST00000308127 LGALS7P47929 136 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 BVES-AS1Q5T3Y7 98 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 AMMECR1LQ6DCA0 310 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 TMEM191AQ9H0A3 160 aa13.13□□□□□ -0.31
SSH3-201ENST00000308127 SMKR1H3BMG3 65 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms