RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RSG1Q9BU20 258 aa4.42□□□□□ -1.7
SSX3-201ENST00000298396 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
SSX3-201ENST00000298396 RHPN1-AS1Q9BWJ2 59 aa4.42□□□□□ -1.7
SSX3-201ENST00000298396 PARD6GQ9BYG4 376 aaPredicted RBP4.42□□□□□ -1.7
SSX3-201ENST00000298396 DOK5Q9P104 306 aa4.42□□□□□ -1.7
SSX3-201ENST00000298396 PEMTQ9UBM1 199 aa4.42□□□□□ -1.7
SSX3-201ENST00000298396 TGP01266 2768 aa4.42□□□□□ -1.7
SSX3-201ENST00000298396 NBEAL2Q6ZNJ1 2754 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 H3BRN7 92 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 MRPS12O15235 138 aaKnown RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 BUB3O43684 328 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 DFFBO76075 338 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 HNRNPCP07910 306 aaKnown RBP eCLIP4.41□□□□□ -1.7
SSX3-201ENST00000298396 RPL29P47914 159 aaKnown RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 EIF2B2P49770 351 aaKnown RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 NKX2-5P52952 324 aaPredicted RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 AP2S1P53680 142 aaPredicted RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 SELENOTP62341 195 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 ZNF345Q14585 488 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 LGALSLQ3ZCW2 172 aaPredicted RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 SPATA31B1PQ5VZV4 182 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 LEMD1Q68G75 181 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 C16orf54Q6UWD8 224 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 KCNRGQ8N5I3 272 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 FAM24BQ8N5W8 94 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 MARC2Q969Z3 335 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 UHRF2Q96PU4 802 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 PRR25Q96S07 402 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 METTL26Q96S19 204 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 MCRIP2Q9BUT9 160 aaKnown RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 PBDC1Q9BVG4 233 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 SCRT1Q9BWW7 348 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 MFFQ9GZY8 342 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 SH3BGRL3Q9H299 93 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 ARV1Q9H2C2 271 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 SLC39A9Q9NUM3 307 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 AURKAIP1Q9NWT8 199 aaPredicted RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 ZNF256Q9Y2P7 627 aaPredicted RBP4.41□□□□□ -1.7
SSX3-201ENST00000298396 PXMP4Q9Y6I8 212 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 SMAD5-AS1Q9Y6J3 95 aa4.41□□□□□ -1.7
SSX3-201ENST00000298396 TRAV5A0A0B4J249 113 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 ZNF98A6NK75 572 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 K7EIL1 84 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 MPDU1O75352 247 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 EIF3GO75821 320 aaKnown RBP eCLIP4.4□□□□□ -1.71
SSX3-201ENST00000298396 ORM2P19652 201 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 NPPCP23582 126 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 ATP6V0CP27449 155 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 INSL3P51460 131 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 B2MP61769 119 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 TMUB2Q71RG4 321 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 SSX7Q7RTT5 188 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 C9orf62Q8N4C0 152 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 HSD17B11Q8NBQ5 300 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 INO80EQ8NBZ0 244 aaPredicted RBP4.4□□□□□ -1.71
SSX3-201ENST00000298396 OR1B1Q8NGR6 318 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 C8orf49Q96NF6 230 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 GINS3Q9BRX5 216 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 SHANK2-AS3Q9BTD1 123 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 SLC25A39Q9BZJ4 359 aaPredicted RBP4.4□□□□□ -1.71
SSX3-201ENST00000298396 ARL6Q9H0F7 186 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 WFDC10AQ9H1F0 79 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 SLC25A32Q9H2D1 315 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 TECRQ9NZ01 308 aaKnown RBP4.4□□□□□ -1.71
SSX3-201ENST00000298396 RABAC1Q9UI14 185 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 HIGD1AQ9Y241 93 aa4.4□□□□□ -1.71
SSX3-201ENST00000298396 SOCS3O14543 225 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 TSPAN4O14817 238 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 BCL2L11O43521 198 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 HYPMO75409 117 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 SCGB2A1O75556 95 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 CFDP00746 253 aaPredicted RBP4.39□□□□□ -1.71
SSX3-201ENST00000298396 FABP1P07148 127 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 CD7P09564 240 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 OR5G3P0C626 314 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 GP9P14770 177 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 NUP62P37198 522 aaPredicted RBP4.39□□□□□ -1.71
SSX3-201ENST00000298396 RAB2AP61019 212 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 ODF3L2Q3SX64 289 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 TCF24Q7RTU0 167 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 OR2K2Q8NGT1 345 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 OR2G3Q8NGZ4 309 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 DYNLRB2Q8TF09 96 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 DCANP1Q8TF63 244 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 ZNF503Q96F45 646 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 FAM167A-AS1Q96KT0 104 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 SLC25A2Q9BXI2 301 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 MS4A6AQ9H2W1 248 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 DNAJC4Q9NNZ3 241 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 TIMM9Q9Y5J7 89 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
SSX3-201ENST00000298396 IGKV3-7A0A075B6H7 116 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 TRAV25A0A0B4J276 109 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 A0A0D9SG52 128 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 BOLA2-SMG1P6H3BVE0 249 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 K7EQG2 157 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 COX7A2P2O60397 106 aa4.38□□□□□ -1.71
SSX3-201ENST00000298396 IFNA5P01569 189 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms