RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 IGLV2-11P01706 119 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 PRNTQ86SH4 94 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 TIMD4Q96H15 378 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 TMEM14CQ9P0S9 112 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 CHD8Q9HCK8 2581 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 NCOR2Q9Y618 2525 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 M0R143 59 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 RAB4AP20338 218 aa15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 BCL6BQ8N143 479 aaPredicted RBP15.75■□□□□ 0.11
SCUBE1-201ENST00000290460 LOC105371242A0A075B767 164 aa15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 ATP5L2Q7Z4Y8 100 aa15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 MIEN1Q9BRT3 115 aa15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 CACNA1BQ00975 2339 aa15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 A8MWL6 223 aa15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 IL4P05112 153 aa15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 HBBP68871 147 aa15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 DAZAP1Q96EP5 407 aaKnown RBP15.74■□□□□ 0.11
SCUBE1-201ENST00000290460 OR2J3O76001 311 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 NUTF2P61970 127 aaKnown RBP15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 RNASEKQ6P5S7 137 aaKnown RBP15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 ZNF491Q8N8L2 437 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 SRSF8Q9BRL6 282 aaKnown RBP15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 SHANK2-AS3Q9BTD1 123 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 ZNF492Q9P255 531 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 NDUFA3O95167 84 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 KLRB1Q12918 225 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 C11orf71Q6IPW1 123 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 DYNAPQ8N1N2 210 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 RNF125Q96EQ8 232 aa15.73■□□□□ 0.11
SCUBE1-201ENST00000290460 ODF3BA8MYP8 253 aa15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 H3BRN7 92 aa15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 HSBP1O75506 76 aa15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 COL8A1P27658 744 aa15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 CEACAM3P40198 252 aa15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 FOXA3P55318 350 aaPredicted RBP15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 NPBQ8NG41 125 aa15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 ZFHX3Q15911 3703 aa15.72■□□□□ 0.11
SCUBE1-201ENST00000290460 TRBV19A0A075B6N1 114 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 KLF5Q13887 457 aaPredicted RBP15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 C5orf64Q2M2E5 130 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 BPIFA4PQ86YQ2 179 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 BORCS7Q96B45 105 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 M0QZ24 198 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 PRTN3P24158 256 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 SSTP61278 116 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 NDPQ00604 133 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 CT83Q5H943 113 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 LCN12Q6JVE5 192 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 ATOH7Q8N100 152 aa15.71■□□□□ 0.11
SCUBE1-201ENST00000290460 ZNF785A8K8V0 405 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 IGLC2P0DOY2 106 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 FCGR2BP31994 310 aaPredicted RBP15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 OR4B1Q8NGF8 309 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 NCBP2LA6PVI3 153 aaKnown RBP15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 M0R1W7 72 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 M0R2Z0 102 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 HLA-DRB1P01911 266 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 NHLH1Q02575 133 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 SPATA45Q537H7 98 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 SIGLEC15Q6ZMC9 328 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 RBPMS2Q6ZRY4 209 aaKnown RBP15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 OR4F17Q8NGA8 305 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 URB1-AS1Q96HZ7 61 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 FANCD2OSQ96PS1 177 aa15.7■□□□□ 0.1
SCUBE1-201ENST00000290460 GNG7O60262 68 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 HOXB4P17483 251 aaPredicted RBP15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 CTRLP40313 264 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 VMO1Q7Z5L0 202 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 ZC2HC1AQ96GY0 325 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 SH2D7A6NKC9 451 aaPredicted RBP15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 NPIPB6E9PJ23 425 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 M0R3E3 92 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 NDUFS7O75251 213 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 IGHV3-23P01764 117 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 PMCHL1Q16048 86 aa15.69■□□□□ 0.1
SCUBE1-201ENST00000290460 A0A1W2PPR1 153 aa15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 FAM181BA6NEQ2 426 aa15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 MAJINQ3KP22 176 aa15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 MRPS12O15235 138 aaKnown RBP15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 TCAPO15273 167 aa15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 ZFP36P26651 326 aaKnown RBP15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 EBLN2Q6P2I7 272 aa15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 ARPC1AQ92747 370 aa15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 GFRA4Q9GZZ7 299 aa15.68■□□□□ 0.1
SCUBE1-201ENST00000290460 IGLV11-55A0A075B6I3 123 aa15.67■□□□□ 0.1
SCUBE1-201ENST00000290460 WI2-2373I1.2A0A1W2PRP0 233 aa15.66■□□□□ 0.1
SCUBE1-201ENST00000290460 F8W735 103 aaPredicted RBP15.66■□□□□ 0.1
SCUBE1-201ENST00000290460 NEU4Q8WWR8 484 aaPredicted RBP15.66■□□□□ 0.1
SCUBE1-201ENST00000290460 ZNF414Q96IQ9 312 aa15.66■□□□□ 0.1
SCUBE1-201ENST00000290460 UCNP55089 124 aa15.66■□□□□ 0.1
SCUBE1-201ENST00000290460 CLEC5AQ9NY25 188 aa15.66■□□□□ 0.1
SCUBE1-201ENST00000290460 BATFQ16520 125 aa15.65■□□□□ 0.1
SCUBE1-201ENST00000290460 Q56UQ5 140 aa15.65■□□□□ 0.1
SCUBE1-201ENST00000290460 ZNF562Q6V9R5 426 aa15.65■□□□□ 0.1
SCUBE1-201ENST00000290460 SOX21Q9Y651 276 aaPredicted RBP15.65■□□□□ 0.1
SCUBE1-201ENST00000290460 TMEM75Q8N9X5 138 aa15.65■□□□□ 0.1
SCUBE1-201ENST00000290460 PSG8Q9UQ74 426 aa15.65■□□□□ 0.1
SCUBE1-201ENST00000290460 NPIPB5A8MRT5 1133 aa15.64■□□□□ 0.09
SCUBE1-201ENST00000290460 OVOL3O00110 214 aa15.64■□□□□ 0.09
SCUBE1-201ENST00000290460 CHEK1O14757 476 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms