RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SAMD5Q5TGI4 173 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 PPP1R27Q86WC6 154 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 YPEL4Q96NS1 127 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 C11orf1Q9H5F2 150 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 MRPL27Q9P0M9 148 aaKnown RBP12.76□□□□□ -0.37
USP43-201ENST00000285199 HBDP02042 147 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 ERVK11-1P61568 191 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 ZNF329Q86UD4 541 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 LINC00312Q9Y6C7 94 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 LY6G6EA0A0G2JKS1 128 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 TMEM213A2RRL7 107 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 WNT2P09544 360 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 U3KQA8 63 aa12.76□□□□□ -0.37
USP43-201ENST00000285199 ADAMTS9Q9P2N4 1935 aa12.75□□□□□ -0.37
USP43-201ENST00000285199 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
USP43-201ENST00000285199 PDLIM4P50479 330 aa12.75□□□□□ -0.37
USP43-201ENST00000285199 PHLDA3Q9Y5J5 127 aa12.75□□□□□ -0.37
USP43-201ENST00000285199 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 FTH1P19P0C7X4 201 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 GAGE1Q13065 139 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 OR5AN1Q8NGI8 311 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 GLMPQ8WWB7 406 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
USP43-201ENST00000285199 RNF125Q96EQ8 232 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 IGLV2-14P01704 120 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 WFDC12Q8WWY7 111 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 IGHV1-24A0A0C4DH33 117 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 ATP5IP56385 69 aaPredicted RBP12.74□□□□□ -0.37
USP43-201ENST00000285199 FAM71F2Q6NXP2 309 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 ASCL5Q7RTU5 278 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 RPRMLQ8N4K4 120 aa12.74□□□□□ -0.37
USP43-201ENST00000285199 SS18L1O75177 396 aaPredicted RBP12.73□□□□□ -0.37
USP43-201ENST00000285199 OTORQ9NRC9 128 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 TPSG1Q9NRR2 321 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 LY96Q9Y6Y9 160 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 OBSL1O75147 1896 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 C17orf100A8MU93 164 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 K7EMI3 77 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 F2RL2O00254 374 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 TMEM200BQ69YZ2 307 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 TMEM133Q9H2Q1 129 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 KIAA1549Q9HCM3 1950 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 SAP30O75446 220 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 LY6HO94772 140 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 PRR7Q8TB68 274 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 IGFBPL1Q8WX77 278 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 DPF1Q92782 380 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 SPOCK3Q9BQ16 436 aa12.73□□□□□ -0.37
USP43-201ENST00000285199 SLC25A39Q9BZJ4 359 aaPredicted RBP12.73□□□□□ -0.37
USP43-201ENST00000285199 CNTFRP26992 372 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 DLX6P56179 175 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 PSG3Q16557 428 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 TMEM14BQ9NUH8 114 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 SOX21Q9Y651 276 aaPredicted RBP12.72□□□□□ -0.37
USP43-201ENST00000285199 HERVK_113P61574 105 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 LYPD2Q6UXB3 125 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 ATP5L2Q7Z4Y8 100 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 ZNF479Q96JC4 524 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 C21orf62Q9NYP8 219 aa12.72□□□□□ -0.37
USP43-201ENST00000285199 A0A1W2PPI3 338 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 SEC11AP67812 179 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 WT1-ASQ06250 92 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 KIAA1549LQ6ZVL6 1849 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 FAM90A9PA6NNJ1 464 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 TM4SF5O14894 197 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 CD5LO43866 347 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 RPL13AP40429 203 aaKnown RBP12.71□□□□□ -0.37
USP43-201ENST00000285199 SPRNQ5BIV9 151 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 Q8NFD4 153 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 C8orf46Q8TAG6 207 aa12.71□□□□□ -0.37
USP43-201ENST00000285199 IGHV2-26A0A0B4J1V2 119 aa12.71□□□□□ -0.38
USP43-201ENST00000285199 H0YJW9 148 aa12.71□□□□□ -0.38
USP43-201ENST00000285199 EMP1P54849 157 aa12.71□□□□□ -0.38
USP43-201ENST00000285199 SCGB3A1Q96QR1 104 aa12.71□□□□□ -0.38
USP43-201ENST00000285199 CENPVQ7Z7K6 275 aaPredicted RBP12.7□□□□□ -0.38
USP43-201ENST00000285199 CHODLQ9H9P2 273 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 CYSLTR1Q9Y271 337 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 A0A1B0GV72 72 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 C15orf65H3BRN8 121 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 SLC25A2Q9BXI2 301 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 TLN2Q9Y4G6 2542 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 TIMM23O14925 209 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 NEUROG1Q92886 237 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 DNAH14Q0VDD8 3507 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 HSD52Q0P140 79 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 BVES-AS1Q5T3Y7 98 aa12.7□□□□□ -0.38
USP43-201ENST00000285199 TRIOO75962 3097 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 IGF2RP11717 2491 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 UTF1Q5T230 341 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 SLC25A48Q6ZT89 311 aaKnown RBP12.69□□□□□ -0.38
USP43-201ENST00000285199 C1RLQ9NZP8 487 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 DKK1O94907 266 aa12.69□□□□□ -0.38
USP43-201ENST00000285199 PRR20EP86478 221 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms