RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 KNCNA6PVL3 124 aa11.77□□□□□ -0.53
PTPRO-201ENST00000281171 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
PTPRO-201ENST00000281171 FAM231DQ6ZW35 169 aa11.77□□□□□ -0.53
PTPRO-201ENST00000281171 IGHV3-64A0A075B6Q5 118 aa11.77□□□□□ -0.53
PTPRO-201ENST00000281171 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.53
PTPRO-201ENST00000281171 PIKFYVEQ9Y2I7 2098 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 ZNHIT1O43257 154 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 C17orf82Q86X59 251 aaPredicted RBP11.76□□□□□ -0.53
PTPRO-201ENST00000281171 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 DUX5Q96PT3 197 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 FAM236AA0A1B0GUQ0 79 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 FAM236BA0A1B0GV22 79 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 PAX1P15863 534 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 CARD19Q96LW7 228 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 CASP8AP2Q9UKL3 1982 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 FLVCR1-AS1Q8TAF5 88 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 TMEM243Q9BU79 118 aa11.76□□□□□ -0.53
PTPRO-201ENST00000281171 TRAV13-1A0A0B4J241 112 aa11.75□□□□□ -0.53
PTPRO-201ENST00000281171 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
PTPRO-201ENST00000281171 GATD1Q8NB37 220 aa11.75□□□□□ -0.53
PTPRO-201ENST00000281171 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
PTPRO-201ENST00000281171 LTBP1Q14766 1721 aa11.75□□□□□ -0.53
PTPRO-201ENST00000281171 CACNA1DQ01668 2161 aa11.75□□□□□ -0.53
PTPRO-201ENST00000281171 CD28P10747 220 aa11.75□□□□□ -0.53
PTPRO-201ENST00000281171 NDUFV3P56181 108 aaKnown RBP11.75□□□□□ -0.53
PTPRO-201ENST00000281171 BRWD1Q9NSI6 2320 aa11.75□□□□□ -0.53
PTPRO-201ENST00000281171 Q6ZUT4 128 aa11.74□□□□□ -0.53
PTPRO-201ENST00000281171 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
PTPRO-201ENST00000281171 PRADC1Q9BSG0 188 aa11.74□□□□□ -0.53
PTPRO-201ENST00000281171 ANKRD36A6QL64 1941 aa11.74□□□□□ -0.53
PTPRO-201ENST00000281171 RFPL3SP0C7P2 107 aa11.74□□□□□ -0.53
PTPRO-201ENST00000281171 SLC25A16P16260 332 aa11.74□□□□□ -0.53
PTPRO-201ENST00000281171 DSCR9P59020 149 aa11.74□□□□□ -0.53
PTPRO-201ENST00000281171 C17orf100A8MU93 164 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 H0YJW9 148 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 TGFBR3LH3BV60 316 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 ATP5G1P05496 136 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 PVRIGQ6DKI7 326 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 WIPF2Q8TF74 440 aaPredicted RBP11.73□□□□□ -0.53
PTPRO-201ENST00000281171 PTH2Q96A98 100 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 E9PLN8 166 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 MORN5Q5VZ52 161 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 UBL5Q9BZL1 73 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 TOMM7Q9P0U1 55 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 ZNF329Q86UD4 541 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 ZNF747Q9BV97 191 aa11.73□□□□□ -0.53
PTPRO-201ENST00000281171 ZNF497Q6ZNH5 498 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 LYZL4Q96KX0 146 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 NTF4P34130 210 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 C3orf56Q8N813 242 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 ANAPC10Q9UM13 185 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 TRPM7Q96QT4 1865 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 HAX1O00165 279 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 BRK1Q8WUW1 75 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 IGHV1-2P23083 117 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 IL15RAQ13261 267 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 ZIC4Q8N9L1 334 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 SCN3AQ9NY46 2000 aa11.72□□□□□ -0.53
PTPRO-201ENST00000281171 ARMS2P0C7Q2 107 aa11.71□□□□□ -0.53
PTPRO-201ENST00000281171 SRD5A1P18405 259 aa11.71□□□□□ -0.53
PTPRO-201ENST00000281171 RSPO4Q2I0M5 234 aaPredicted RBP11.71□□□□□ -0.53
PTPRO-201ENST00000281171 FAM104BQ5XKR9 115 aa11.71□□□□□ -0.53
PTPRO-201ENST00000281171 FOXA2Q9Y261 457 aaPredicted RBP11.71□□□□□ -0.53
PTPRO-201ENST00000281171 NDUFB8O95169 186 aa11.71□□□□□ -0.53
PTPRO-201ENST00000281171 MRPL55Q7Z7F7 128 aaKnown RBP11.71□□□□□ -0.53
PTPRO-201ENST00000281171 SMKR1H3BMG3 65 aa11.71□□□□□ -0.54
PTPRO-201ENST00000281171 C11orf52Q96A22 123 aa11.71□□□□□ -0.54
PTPRO-201ENST00000281171 PSG7Q13046 419 aa11.7□□□□□ -0.54
PTPRO-201ENST00000281171 TMEM86BQ8N661 226 aa11.7□□□□□ -0.54
PTPRO-201ENST00000281171 C15orf62A8K5M9 175 aa11.7□□□□□ -0.54
PTPRO-201ENST00000281171 DUTP33316 252 aaKnown RBP11.7□□□□□ -0.54
PTPRO-201ENST00000281171 IGKV3OR2-268A0A0C4DH90 116 aa11.7□□□□□ -0.54
PTPRO-201ENST00000281171 PCP2Q8IVA1 136 aa11.7□□□□□ -0.54
PTPRO-201ENST00000281171 Q8N8P6 123 aa11.7□□□□□ -0.54
PTPRO-201ENST00000281171 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
PTPRO-201ENST00000281171 HIGD1BQ9P298 99 aa11.7□□□□□ -0.54
PTPRO-201ENST00000281171 A0A0U1RRA0 63 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 LEPROTO15243 131 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 C5orf64Q2M2E5 130 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 GLMPQ8WWB7 406 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 Q6ZS49 121 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 LAMTOR3Q9UHA4 124 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 A0A1B0GX51 115 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 SH2D1AO60880 128 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 RPL32P62910 135 aaKnown RBP11.69□□□□□ -0.54
PTPRO-201ENST00000281171 TMEM105Q8N8V8 129 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 CHD3Q12873 2000 aaKnown RBP11.69□□□□□ -0.54
PTPRO-201ENST00000281171 IGKV3D-20A0A0C4DH25 116 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 PAX9P55771 341 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 ATP1A1-AS1Q5TC04 95 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 Q86TA4 180 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
PTPRO-201ENST00000281171 FAM168AQ92567 244 aa11.68□□□□□ -0.54
PTPRO-201ENST00000281171 RNF125Q96EQ8 232 aa11.68□□□□□ -0.54
PTPRO-201ENST00000281171 MT-ATP8P03928 68 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms