RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 OPCMLQ14982 345 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 DEFB135Q30KP9 77 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 ACTL10Q5JWF8 245 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 SPATA31B1PQ5VZV4 182 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 RNF182Q8N6D2 247 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 HSD17B11Q8NBQ5 300 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 SHANK2-AS3Q9BTD1 123 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 SLC39A9Q9NUM3 307 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 ARPC5O15511 151 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 HLA-DMBP28068 263 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 PRR20EP86478 221 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 PRR20CP86479 221 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 PRR20DP86480 221 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 PRR20BP86481 221 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 PRR20AP86496 221 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 GDF5OSQ5U4N7 250 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 C10orf113Q5VZT2 155 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 Q6ZRG5 221 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 C17orf77Q96MU5 243 aa5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 WDR61Q9GZS3 305 aaKnown RBP5.36□□□□□ -1.55
DEPDC1B-201ENST00000265036 RNF222A6NCQ9 220 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 CFDP00746 253 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 GALR1P47211 349 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 RCHY1Q96PM5 261 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 PFDN2Q9UHV9 154 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 LOC102724200A0A096LPH7 203 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 SLC17A3O00476 420 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 CD5P06127 495 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 ZNF705DP0CH99 300 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 ZNF705BP0CI00 300 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 PYYP10082 97 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 LYL1P12980 280 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 ATF4P18848 351 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 NUP62P37198 522 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 PLP1P60201 277 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 SNRPD3P62318 126 aaKnown RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 ATP6V1FQ16864 119 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 ZNF709Q8N972 641 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 C16orf92Q96LL3 132 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 C20orf173Q96LM9 149 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 FAM210AQ96ND0 272 aa5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 SEPSECSQ9HD40 501 aaKnown RBP5.35□□□□□ -1.55
DEPDC1B-201ENST00000265036 A0A1B0GVG6 124 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 IFNA5P01569 189 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 RPL29P47914 159 aaKnown RBP5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 C1orf194Q5T5A4 169 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 FAM78BQ5VT40 261 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 SH3BGRL3Q9H299 93 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 DNAJC4Q9NNZ3 241 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 CLEC5AQ9NY25 188 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 STARD9Q9P2P6 4700 aa5.34□□□□□ -1.55
DEPDC1B-201ENST00000265036 A8MZ25 164 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 SOCS3O14543 225 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 HMGB3O15347 200 aaKnown RBP5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 CA1P00915 261 aaPredicted RBP5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 RPL7P18124 248 aaKnown RBP5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 FXYD7P58549 80 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 FFAR4Q5NUL3 377 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 MIR17HGQ75NE6 70 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 STHQ8IWL8 128 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 OR11H4Q8NGC9 324 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 LRRC20Q8TCA0 184 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 SCGB1C1Q8TD33 95 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 AQP10Q96PS8 301 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 TM2D3Q9BRN9 247 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 ZMAT4Q9H898 229 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 TNFSF18Q9UNG2 199 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 U3KQK5 164 aa5.34□□□□□ -1.56
DEPDC1B-201ENST00000265036 H3BQ15 152 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 MPDU1O75352 247 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 OR10J4P0C629 311 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 CD300CQ08708 224 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 RPL7L1Q6DKI1 246 aaKnown RBP5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 LINC00322Q6ZN03 302 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 OR4B1Q8NGF8 309 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 PFDN5Q99471 154 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 ELOA3CA0A087WX78 387 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 TRAV8-2A0A0B4J237 113 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 MRPS12O15235 138 aaKnown RBP5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 C4BPBP20851 252 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 RAB2AP61019 212 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 BPIFA4PQ86YQ2 179 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 OR1L4Q8NGR5 311 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 BLNKQ8WV28 456 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 SPATA25Q9BR10 227 aa5.33□□□□□ -1.56
DEPDC1B-201ENST00000265036 LYSTQ99698 3801 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 TRAV2A0A0B4J234 112 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 ZNF705FA8MVS1 300 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 C17orf112F2Z3M2 114 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 ISLRO14498 428 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 OR7C2O60412 319 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 ATP6V0CP27449 155 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 Q6ZNX1 250 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 ZNF738Q8NE65 137 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 MFFQ9GZY8 342 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 PSMB3P49720 205 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 APOC4P55056 127 aa5.32□□□□□ -1.56
DEPDC1B-201ENST00000265036 ZNF266Q14584 549 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms