RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 GPX4P36969 197 aaPredicted RBP12.96□□□□□ -0.33
SHANK3-201ENST00000262795 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
SHANK3-201ENST00000262795 THAP8Q8NA92 274 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 CADP27708 2225 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 IGKV1D-13A0A0B4J2D9 117 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 G3V318 75 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 IGKV1-13P0DP09 117 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 CD300EQ496F6 205 aaPredicted RBP12.96□□□□□ -0.33
SHANK3-201ENST00000262795 C1orf100Q5SVJ3 147 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 NDUFS7O75251 213 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 PSG8Q9UQ74 426 aa12.96□□□□□ -0.33
SHANK3-201ENST00000262795 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.34
SHANK3-201ENST00000262795 C5orf24Q7Z6I8 188 aa12.96□□□□□ -0.34
SHANK3-201ENST00000262795 HIGD1CA8MV81 97 aa12.96□□□□□ -0.34
SHANK3-201ENST00000262795 ATP6V0E1O15342 81 aa12.96□□□□□ -0.34
SHANK3-201ENST00000262795 SUMO4Q6EEV6 95 aa12.96□□□□□ -0.34
SHANK3-201ENST00000262795 DTX1Q86Y01 620 aa12.96□□□□□ -0.34
SHANK3-201ENST00000262795 ARID2Q68CP9 1835 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 UBE2BP63146 152 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 WISP3O95389 354 aaPredicted RBP12.95□□□□□ -0.34
SHANK3-201ENST00000262795 LTBP1Q14766 1721 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 NKAPP1Q8N9T2 125 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 CCL1P22362 96 aa12.95□□□□□ -0.34
SHANK3-201ENST00000262795 IGHV3-38A0A0C4DH36 116 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 TMEM126AQ9H061 195 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 EPDR1Q9UM22 224 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 FAM120AOSQ5T036 256 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 SLC25A2Q9BXI2 301 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 ARFGEF3Q5TH69 2177 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 TCTEX1D4Q5JR98 221 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 C1QL4Q86Z23 238 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 USMG5Q96IX5 58 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
SHANK3-201ENST00000262795 FAM223BA6NKX1 122 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 AZU1P20160 251 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 FAM223AQ8IWN6 122 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 TMEM158Q8WZ71 300 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 EP300Q09472 2414 aaPredicted RBP12.94□□□□□ -0.34
SHANK3-201ENST00000262795 ZSWIM8A7E2V4 1837 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 UBE2CO00762 179 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 COQ2Q96H96 371 aa12.94□□□□□ -0.34
SHANK3-201ENST00000262795 SERF1AO75920 110 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 NCR2O95944 276 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 ESM1Q9NQ30 184 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 GATA3P23771 443 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 CIARTQ8N365 385 aaPredicted RBP12.93□□□□□ -0.34
SHANK3-201ENST00000262795 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
SHANK3-201ENST00000262795 ORMDL3Q8N138 153 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 DOCK4Q8N1I0 1966 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 SRP19P09132 144 aaKnown RBP12.93□□□□□ -0.34
SHANK3-201ENST00000262795 ANK1P16157 1881 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 BTCP35070 178 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 GAGE6Q13070 117 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 LAMTOR2Q9Y2Q5 125 aa12.93□□□□□ -0.34
SHANK3-201ENST00000262795 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
SHANK3-201ENST00000262795 A0A087WV48 116 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 TRAV3A0A0B4J244 114 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 K7EM74 188 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 C5orf30Q96GV9 206 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 ANAPC10Q9UM13 185 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 A0A0G2JMZ2 1700 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 LRRC37A2A6NM11 1700 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 ZNF114Q8NC26 417 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 CD200R1LQ6Q8B3 271 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 PRB2P02812 416 aaPredicted RBP12.92□□□□□ -0.34
SHANK3-201ENST00000262795 VWC2Q2TAL6 325 aa12.92□□□□□ -0.34
SHANK3-201ENST00000262795 HAPLN4Q86UW8 402 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 CACNG8Q8WXS5 425 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 IGHV4-59P01825 116 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 CXCL1P09341 107 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 DEFB112Q30KQ8 113 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 RNF222A6NCQ9 220 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 SRSF1Q07955 248 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHANK3-201ENST00000262795 IGHV2-70DA0A0C4DH43 119 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 TOMM40O96008 361 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 PLA2G5P39877 138 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 TCRAP04437 139 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 SAMD5Q5TGI4 173 aa12.91□□□□□ -0.34
SHANK3-201ENST00000262795 F8W735 103 aaPredicted RBP12.9□□□□□ -0.34
SHANK3-201ENST00000262795 NAPSAO96009 420 aa12.9□□□□□ -0.34
SHANK3-201ENST00000262795 C14orf178Q8N769 122 aaPredicted RBP12.9□□□□□ -0.34
SHANK3-201ENST00000262795 DAZ1Q9NQZ3 744 aaKnown RBP12.9□□□□□ -0.34
SHANK3-201ENST00000262795 DUTP33316 252 aaKnown RBP12.9□□□□□ -0.34
SHANK3-201ENST00000262795 SLC25A48Q6ZT89 311 aaKnown RBP12.9□□□□□ -0.34
SHANK3-201ENST00000262795 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
SHANK3-201ENST00000262795 FLVCR1-AS1Q8TAF5 88 aa12.9□□□□□ -0.34
SHANK3-201ENST00000262795 TSSC4Q9Y5U2 329 aaPredicted RBP12.9□□□□□ -0.34
SHANK3-201ENST00000262795 A8MWV9 139 aa12.9□□□□□ -0.34
SHANK3-201ENST00000262795 C5orf47Q569G3 176 aa12.9□□□□□ -0.34
SHANK3-201ENST00000262795 C9orf153Q5TBE3 101 aa12.9□□□□□ -0.34
SHANK3-201ENST00000262795 NYNRINQ9P2P1 1898 aaKnown RBP12.9□□□□□ -0.34
SHANK3-201ENST00000262795 Q6ZQT7 251 aa12.9□□□□□ -0.35
SHANK3-201ENST00000262795 ORAOV1Q8WV07 137 aa12.9□□□□□ -0.35
SHANK3-201ENST00000262795 CCL24O00175 119 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BKO60814 126 aa12.89□□□□□ -0.35
SHANK3-201ENST00000262795 HIST1H2BJP06899 126 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms