RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 OR10G9Q8NGN4 311 aa18.45■□□□□ 0.54
SCN1B-201ENST00000262631 OR10G7Q8NGN6 311 aa18.45■□□□□ 0.54
SCN1B-201ENST00000262631 LINC00052Q96N35 136 aa18.45■□□□□ 0.54
SCN1B-201ENST00000262631 SEC14L6B5MCN3 397 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 MARC2Q969Z3 335 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 SLC25A22Q9H936 323 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 TRAV5A0A0B4J249 113 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 SAP30O75446 220 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 MIR17HGQ75NE6 70 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 RNF2Q99496 336 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 SIGLEC8Q9NYZ4 499 aa18.44■□□□□ 0.54
SCN1B-201ENST00000262631 TMEM41BQ5BJD5 291 aa18.43■□□□□ 0.54
SCN1B-201ENST00000262631 AKR1C8PQ5T2L2 129 aa18.43■□□□□ 0.54
SCN1B-201ENST00000262631 ALKAL2Q6UX46 152 aa18.43■□□□□ 0.54
SCN1B-201ENST00000262631 MBP02144 154 aa18.42■□□□□ 0.54
SCN1B-201ENST00000262631 FHITP49789 147 aa18.42■□□□□ 0.54
SCN1B-201ENST00000262631 FAM74A1Q5RGS3 127 aa18.42■□□□□ 0.54
SCN1B-201ENST00000262631 IGLL1P15814 213 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 C16orf54Q6UWD8 224 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 GLMPQ8WWB7 406 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 NARS2Q96I59 477 aaKnown RBP18.41■□□□□ 0.54
SCN1B-201ENST00000262631 A0A1W2PS18 150 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 BTN1A1Q13410 526 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 ZNF726P1Q15940 193 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 EIF5AL1Q6IS14 154 aaKnown RBP18.41■□□□□ 0.54
SCN1B-201ENST00000262631 SSX7Q7RTT5 188 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 PCNPQ8WW12 178 aaKnown RBP18.41■□□□□ 0.54
SCN1B-201ENST00000262631 FUT9Q9Y231 359 aa18.41■□□□□ 0.54
SCN1B-201ENST00000262631 NOTCH3Q9UM47 2321 aa18.4■□□□□ 0.54
SCN1B-201ENST00000262631 HMGB3O15347 200 aaKnown RBP18.4■□□□□ 0.54
SCN1B-201ENST00000262631 RHOBP62745 196 aa18.4■□□□□ 0.54
SCN1B-201ENST00000262631 DEFB114Q30KQ6 69 aa18.4■□□□□ 0.54
SCN1B-201ENST00000262631 DYNLRB2Q8TF09 96 aa18.4■□□□□ 0.54
SCN1B-201ENST00000262631 PHYHIPLQ96FC7 376 aa18.4■□□□□ 0.54
SCN1B-201ENST00000262631 PRR31Q5SQ13 230 aa18.39■□□□□ 0.53
SCN1B-201ENST00000262631 C1orf194Q5T5A4 169 aa18.39■□□□□ 0.53
SCN1B-201ENST00000262631 OR8I2Q8N0Y5 310 aa18.39■□□□□ 0.53
SCN1B-201ENST00000262631 FAM167A-AS1Q96KT0 104 aa18.39■□□□□ 0.53
SCN1B-201ENST00000262631 SLC25A2Q9BXI2 301 aa18.39■□□□□ 0.53
SCN1B-201ENST00000262631 MRPL32Q9BYC8 188 aaKnown RBP18.39■□□□□ 0.53
SCN1B-201ENST00000262631 UMAD1C9J7I0 102 aa18.38■□□□□ 0.53
SCN1B-201ENST00000262631 CD300EQ496F6 205 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-201ENST00000262631 S100A7AQ86SG5 101 aa18.38■□□□□ 0.53
SCN1B-201ENST00000262631 TMEM231Q9H6L2 316 aa18.38■□□□□ 0.53
SCN1B-201ENST00000262631 TECRQ9NZ01 308 aaKnown RBP18.38■□□□□ 0.53
SCN1B-201ENST00000262631 A0A1W2PPV4 95 aa18.38■□□□□ 0.53
SCN1B-201ENST00000262631 CDC34P49427 236 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-201ENST00000262631 FAM90A2PQ658T7 463 aa18.38■□□□□ 0.53
SCN1B-201ENST00000262631 RAB24Q969Q5 203 aa18.38■□□□□ 0.53
SCN1B-201ENST00000262631 GRAMD2BQ96HH9 432 aa18.38■□□□□ 0.53
SCN1B-201ENST00000262631 IZUMO1RA6ND01 250 aa18.37■□□□□ 0.53
SCN1B-201ENST00000262631 IGLV1-51P01701 117 aa18.37■□□□□ 0.53
SCN1B-201ENST00000262631 BMI1P35226 326 aa18.37■□□□□ 0.53
SCN1B-201ENST00000262631 SULT1A2P50226 295 aa18.37■□□□□ 0.53
SCN1B-201ENST00000262631 TCF24Q7RTU0 167 aa18.37■□□□□ 0.53
SCN1B-201ENST00000262631 FAM213BQ8TBF2 198 aa18.37■□□□□ 0.53
SCN1B-201ENST00000262631 SMAD5-AS1Q9Y6J3 95 aa18.37■□□□□ 0.53
SCN1B-201ENST00000262631 IGKV3-7A0A075B6H7 116 aa18.36■□□□□ 0.53
SCN1B-201ENST00000262631 MRPS12O15235 138 aaKnown RBP18.36■□□□□ 0.53
SCN1B-201ENST00000262631 SNRPCP09234 159 aaKnown RBP18.36■□□□□ 0.53
SCN1B-201ENST00000262631 S100A7P31151 101 aa18.36■□□□□ 0.53
SCN1B-201ENST00000262631 C9orf66Q5T8R8 295 aa18.36■□□□□ 0.53
SCN1B-201ENST00000262631 TMEM61Q8N0U2 210 aa18.36■□□□□ 0.53
SCN1B-201ENST00000262631 MCRIP2Q9BUT9 160 aaKnown RBP18.36■□□□□ 0.53
SCN1B-201ENST00000262631 ACTR3CQ9C0K3 210 aaPredicted RBP18.36■□□□□ 0.53
SCN1B-201ENST00000262631 FLI1Q01543 452 aaPredicted RBP18.35■□□□□ 0.53
SCN1B-201ENST00000262631 SIGLEC15Q6ZMC9 328 aa18.35■□□□□ 0.53
SCN1B-201ENST00000262631 ZNF503Q96F45 646 aa18.35■□□□□ 0.53
SCN1B-201ENST00000262631 C17orf77Q96MU5 243 aa18.35■□□□□ 0.53
SCN1B-201ENST00000262631 PYYP10082 97 aa18.34■□□□□ 0.53
SCN1B-201ENST00000262631 RPL11P62913 178 aaKnown RBP18.34■□□□□ 0.53
SCN1B-201ENST00000262631 OXLD1Q5BKU9 147 aa18.34■□□□□ 0.53
SCN1B-201ENST00000262631 GP9P14770 177 aa18.34■□□□□ 0.53
SCN1B-201ENST00000262631 RPL7P18124 248 aaKnown RBP18.34■□□□□ 0.53
SCN1B-201ENST00000262631 INSL3P51460 131 aa18.34■□□□□ 0.53
SCN1B-201ENST00000262631 BPIFA4PQ86YQ2 179 aa18.33■□□□□ 0.52
SCN1B-201ENST00000262631 CLRN3Q8NCR9 226 aa18.33■□□□□ 0.52
SCN1B-201ENST00000262631 CTXND1A0A1B0GTU2 59 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 OR7C2O60412 319 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 STAG3L2P0CL84 134 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 STAG3L3P0CL85 134 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 RAB5CP51148 216 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 LCN15Q6UWW0 184 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 GBGT1Q8N5D6 347 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 GPR82Q96P67 336 aa18.32■□□□□ 0.52
SCN1B-201ENST00000262631 HELTA6NFD8 242 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 H3BQ15 152 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 OR10J4P0C629 311 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 ARL14EPLP0DKL9 152 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 IGLC2P0DOY2 106 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 TAS2R45P59539 299 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 CTAG1AP78358 180 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 KHDC3LQ587J8 217 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 DPPA3Q6W0C5 159 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 TMEM14CQ9P0S9 112 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 RNF24Q9Y225 148 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 H3BTX0 84 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 WIPF1O43516 503 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 GALR1P47211 349 aa18.31■□□□□ 0.52
SCN1B-201ENST00000262631 FGF8P55075 233 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms