RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 UFC1Q9Y3C8 167 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 DIAPH2-AS1Q14236 149 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 WFDC2Q14508 124 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 FOXC2Q99958 501 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 TRGV8A0A0C4DH27 118 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 LY6G6EA0A0G2JKS1 128 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 PRSS46E5RG02 174 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 K7ESF4 209 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 TCRAP04437 139 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 COX7A1P24310 79 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 IFI27L1Q96BM0 104 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 RAB9BQ9NP90 201 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 U3KQA8 63 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 KBTBD11-OT1A0A1B0GTJ5 212 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 A0A1W2PPM0 123 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 RAB9AP51151 201 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 FAM167A-AS1Q96KT0 104 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 HIGD1AQ9Y241 93 aa12.85□□□□□ -0.35
PRPF40B-201ENST00000261897 G3V4G9 280 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 PATE2Q6UY27 113 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 ZNF747Q9BV97 191 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 SMAD7O15105 426 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 WISP2O76076 250 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 CEACAM3P40198 252 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 RBPJQ06330 500 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 MZT1Q08AG7 82 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 RNFT1Q5M7Z0 435 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 TPSG1Q9NRR2 321 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 SPRR3Q9UBC9 169 aa12.84□□□□□ -0.35
PRPF40B-201ENST00000261897 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.35
PRPF40B-201ENST00000261897 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.35
PRPF40B-201ENST00000261897 TCRBV4S1A1TA0A5B7 111 aa12.83□□□□□ -0.35
PRPF40B-201ENST00000261897 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.35
PRPF40B-201ENST00000261897 C19orf24Q9BVV8 132 aa12.83□□□□□ -0.35
PRPF40B-201ENST00000261897 KLF5Q13887 457 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 HES1Q14469 280 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 NPFFR1Q9GZQ6 430 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 TMPRSS3P57727 454 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 FXYD5Q96DB9 178 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 C17orf77Q96MU5 243 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 RASL11BQ9BPW5 248 aa12.83□□□□□ -0.36
PRPF40B-201ENST00000261897 TMEM189A5PLL7 270 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 H3BRM9 83 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 FXYD2P54710 66 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 WT1-ASQ06250 92 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 C2CD3Q4AC94 2353 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 LOC400499M0QZD8 3231 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 RASL11AQ6T310 242 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 AGRNO00468 2067 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 NDUFA3O95167 84 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 IGHV3-23P01764 117 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 LOXL3P58215 753 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 STXBP6Q8NFX7 210 aa12.82□□□□□ -0.36
PRPF40B-201ENST00000261897 LTAP01374 205 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 FAM120AOSQ5T036 256 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 LYZL1Q6UWQ5 148 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 C2orf91Q6ZV80 131 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 NEU4Q8WWR8 484 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 ZNF479Q96JC4 524 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 H7C2G1 150 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 Q8TAT8 98 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 GAGE12HA6NDE8 117 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 NDUFS8O00217 210 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 NKX2-8O15522 239 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 LAMTOR5O43504 91 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 EIF4EBP1Q13541 118 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 FAM90A1Q86YD7 464 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 RNF7Q9UBF6 113 aa12.81□□□□□ -0.36
PRPF40B-201ENST00000261897 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 PROCRQ9UNN8 238 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 NPIPB5A8MRT5 1133 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 LEPP41159 167 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 C2orf83Q53S99 150 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 OR5AN1Q8NGI8 311 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 OR5A1Q8NGJ0 315 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 IGFBPL1Q8WX77 278 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 TNFRSF14Q92956 283 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 ORMDL3Q8N138 153 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 TMEM178AQ8NBL3 297 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 SIGLEC8Q9NYZ4 499 aa12.8□□□□□ -0.36
PRPF40B-201ENST00000261897 HBDP02042 147 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 ZC2HC1BQ5TFG8 222 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 FMC1Q96HJ9 113 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 AAMDCQ9H7C9 122 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 SPG11Q96JI7 2443 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 BDP1A6H8Y1 2624 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 RPL27AP46776 148 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 WIPF2Q8TF74 440 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 ZNF714Q96N38 554 aa12.79□□□□□ -0.36
PRPF40B-201ENST00000261897 TRAV26-1A0A087WT03 109 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms