RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 TMEM97Q5BJF2 176 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 SLC25A48Q6ZT89 311 aaKnown RBP15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 OR10AG1Q8NH19 301 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 IZUMO1RA6ND01 250 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 SYS1-DBNDD2H3BUS1 97 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 J3QR89 54 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 ISLRO14498 428 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 DLX1P56177 255 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 RNASEKQ6P5S7 137 aaKnown RBP15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 SPATA12Q7Z6I5 190 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 Q8N7P7 452 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 ZBTB34Q8NCN2 500 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 TMEM133Q9H2Q1 129 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 TP73-AS1Q9UF72 201 aa15.15■□□□□ 0.02
COL4A3BP-201ENST00000261415 hDV102S1A0JD36 115 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 MPDU1O75352 247 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 GNG4P50150 75 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 OR2T6Q8NHC8 308 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 VSTM2AQ8TAG5 236 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 ZNRD1Q9P1U0 126 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 M0R1W7 72 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 BPIFA4PQ86YQ2 179 aa15.14■□□□□ 0.01
COL4A3BP-201ENST00000261415 GAGE12HA6NDE8 117 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 HIST1H1EP10412 219 aaKnown RBP15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 AREGP15514 252 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 EIF4EBP1Q13541 118 aaPredicted RBP15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 RAB31Q13636 194 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 C5orf64Q2M2E5 130 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 KIR3DL3Q8N743 410 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 WDR83OSQ9Y284 106 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 PRRC2AP48634 2157 aaKnown RBP15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 PROP1O75360 226 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 SAA2P0DJI9 122 aaPredicted RBP15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 SLAQ13239 276 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 ZNF585BQ52M93 769 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 ABHD12Q8N2K0 398 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 C8orf31Q8N9H6 132 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 OR4A5Q8NH83 315 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 OR9G1Q8NH87 305 aa15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 TECRQ9NZ01 308 aaKnown RBP15.13■□□□□ 0.01
COL4A3BP-201ENST00000261415 H3BUT2 72 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 PRB3Q04118 309 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 RPL39P5Q59GN2 51 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 FA2HQ7L5A8 372 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 MRAP2Q96G30 205 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 YTHDF2Q9Y5A9 579 aaKnown RBP15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 A0A096LNT2 108 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 A0A0G2JLM5 398 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 APOA2P02652 100 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 SLC35B1P78383 322 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 RPL24P83731 157 aaKnown RBP15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 C1orf229Q6ZS94 237 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 LINC00311Q8N616 119 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 ZC2HC1AQ96GY0 325 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 THYN1Q9P016 225 aa15.12■□□□□ 0.01
COL4A3BP-201ENST00000261415 HELTA6NFD8 242 aa15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 ZNF207O43670 478 aaKnown RBP15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 COX8AP10176 69 aa15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 OPRK1P41145 380 aa15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 TIGITQ495A1 244 aa15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 C1orf122Q6ZSJ8 110 aa15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 KRTAP1-3Q8IUG1 177 aa15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.11■□□□□ 0.01
COL4A3BP-201ENST00000261415 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 ZNF16P17020 682 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 RPL30P62888 115 aaKnown RBP15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 GCSAMLQ5JQS6 135 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 JMJD8Q96S16 334 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 HSD17B10Q99714 261 aaKnown RBP15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 SPCS1Q9Y6A9 102 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 OR2J3O76001 311 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 PRTN3P24158 256 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 COX7A1P24310 79 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 TCL1AP56279 114 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 OR10X1Q8NGY0 326 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 SPATA25Q9BR10 227 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 SIRPDQ9H106 197 aa15.1■□□□□ 0.01
COL4A3BP-201ENST00000261415 LINC00473A8K010 186 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 GCHFRP30047 84 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 DUTP33316 252 aaKnown RBP15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 LINC00205P59089 165 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 CATR1Q13166 79 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 CENPWQ5EE01 88 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 VMO1Q7Z5L0 202 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 CHCHD1Q96BP2 118 aaKnown RBP15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 IGLV1-47P01700 117 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 OR5AL1P0C617 328 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 RNASE7Q9H1E1 156 aaKnown RBP15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 CCDC168Q8NDH2 2452 aa15.09■□□□□ 0.01
COL4A3BP-201ENST00000261415 TEX48A0A1B0GUV7 120 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 A0A1W2PPM0 123 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 K7EQM0 130 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 LEPROTL1O95214 131 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 IBA57Q5T440 356 aaKnown RBP15.08■□□□□ 0
COL4A3BP-201ENST00000261415 C2orf91Q6ZV80 131 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 S1PR3Q99500 378 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 INSIG2Q9Y5U4 225 aa15.08■□□□□ 0
COL4A3BP-201ENST00000261415 ITPR3Q14573 2671 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms