RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 PRR20BP86481 221 aa12.79□□□□□ -0.36
MRPL28-201ENST00000199706 PRR20AP86496 221 aa12.79□□□□□ -0.36
MRPL28-201ENST00000199706 EWSR1Q01844 656 aaKnown RBP eCLIP12.79□□□□□ -0.36
MRPL28-201ENST00000199706 SPATA31B1PQ5VZV4 182 aa12.79□□□□□ -0.36
MRPL28-201ENST00000199706 ASB13Q8WXK3 278 aa12.79□□□□□ -0.36
MRPL28-201ENST00000199706 ARL6Q9H0F7 186 aa12.79□□□□□ -0.36
MRPL28-201ENST00000199706 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
MRPL28-201ENST00000199706 ALG5Q9Y673 324 aa12.79□□□□□ -0.36
MRPL28-201ENST00000199706 A0A087X0K7 114 aa12.78□□□□□ -0.36
MRPL28-201ENST00000199706 RPL29P47914 159 aaKnown RBP12.78□□□□□ -0.36
MRPL28-201ENST00000199706 OPCMLQ14982 345 aa12.78□□□□□ -0.36
MRPL28-201ENST00000199706 DEFB135Q30KP9 77 aa12.78□□□□□ -0.36
MRPL28-201ENST00000199706 LRRC37A5PQ49AS3 106 aa12.78□□□□□ -0.36
MRPL28-201ENST00000199706 IL17DQ8TAD2 202 aa12.78□□□□□ -0.36
MRPL28-201ENST00000199706 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
MRPL28-201ENST00000199706 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
MRPL28-201ENST00000199706 UBE2L5PA0A1B0GUS4 154 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 OR5G3P0C626 314 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 HLA-DRB4P13762 266 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 RGS21Q2M5E4 152 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 PATE2Q6UY27 113 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 FOXI2Q6ZQN5 318 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 Q6ZRG5 221 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 PFDN5Q99471 154 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 SLC25A22Q9H936 323 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 DOK5Q9P104 306 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 HLA-DRB4X5D2U9 266 aa12.77□□□□□ -0.37
MRPL28-201ENST00000199706 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 LYL1P12980 280 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 CXCL2P19875 107 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 OR1L4Q8NGR5 311 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 C17orf77Q96MU5 243 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
MRPL28-201ENST00000199706 H3BMM0 161 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 CA1P00915 261 aaPredicted RBP12.75□□□□□ -0.37
MRPL28-201ENST00000199706 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 LINC00305Q7Z4B0 112 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 UHRF2Q96PU4 802 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 NPCDR1Q9BY65 106 aa12.75□□□□□ -0.37
MRPL28-201ENST00000199706 SAV1Q9H4B6 383 aaPredicted RBP12.75□□□□□ -0.37
MRPL28-201ENST00000199706 KNCNA6PVL3 124 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 MRPS12O15235 138 aaKnown RBP12.74□□□□□ -0.37
MRPL28-201ENST00000199706 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
MRPL28-201ENST00000199706 FGF7P21781 194 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 B2MP61769 119 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 NUTF2P61970 127 aaKnown RBP12.74□□□□□ -0.37
MRPL28-201ENST00000199706 NHLH2Q02577 135 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 C10orf113Q5VZT2 155 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 C16orf92Q96LL3 132 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 C1QTNF4Q9BXJ3 329 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 MED28Q9H204 178 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 RPRMQ9NS64 109 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 SLC39A9Q9NUM3 307 aa12.74□□□□□ -0.37
MRPL28-201ENST00000199706 CXCL3P19876 107 aa12.73□□□□□ -0.37
MRPL28-201ENST00000199706 OXA1LQ15070 435 aa12.73□□□□□ -0.37
MRPL28-201ENST00000199706 MIC13Q5XKP0 118 aa12.73□□□□□ -0.37
MRPL28-201ENST00000199706 BPIFA4PQ86YQ2 179 aa12.73□□□□□ -0.37
MRPL28-201ENST00000199706 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
MRPL28-201ENST00000199706 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
MRPL28-201ENST00000199706 KMT2CQ8NEZ4 4911 aaKnown RBP12.72□□□□□ -0.37
MRPL28-201ENST00000199706 A8MTW9 85 aa12.72□□□□□ -0.37
MRPL28-201ENST00000199706 CASC10Q5T4H9 136 aa12.72□□□□□ -0.37
MRPL28-201ENST00000199706 LCN15Q6UWW0 184 aa12.72□□□□□ -0.37
MRPL28-201ENST00000199706 OR11H7Q8NGC8 314 aa12.72□□□□□ -0.37
MRPL28-201ENST00000199706 ATP5SQ99766 215 aa12.72□□□□□ -0.37
MRPL28-201ENST00000199706 WDR61Q9GZS3 305 aaKnown RBP12.72□□□□□ -0.37
MRPL28-201ENST00000199706 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
MRPL28-201ENST00000199706 PXMP4Q9Y6I8 212 aa12.72□□□□□ -0.37
MRPL28-201ENST00000199706 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.37
MRPL28-201ENST00000199706 C4BPBP20851 252 aa12.71□□□□□ -0.37
MRPL28-201ENST00000199706 RPL12P30050 165 aaKnown RBP12.71□□□□□ -0.37
MRPL28-201ENST00000199706 LINC00052Q96N35 136 aa12.71□□□□□ -0.37
MRPL28-201ENST00000199706 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.37
MRPL28-201ENST00000199706 PARD6GQ9BYG4 376 aaPredicted RBP12.71□□□□□ -0.37
MRPL28-201ENST00000199706 CLEC5AQ9NY25 188 aa12.71□□□□□ -0.37
MRPL28-201ENST00000199706 TENM2Q9NT68 2774 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 TRAV8-2A0A0B4J237 113 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 A0A0J9YX75 114 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
MRPL28-201ENST00000199706 IGLC2P0DOY2 106 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 FGL1Q08830 312 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 CLINT1Q14677 625 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 FCN2Q15485 313 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 GUK1Q16774 197 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 THAP6Q8TBB0 222 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 RARRES2Q99969 163 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
MRPL28-201ENST00000199706 STARD9Q9P2P6 4700 aa12.69□□□□□ -0.38
MRPL28-201ENST00000199706 ZNF253O75346 499 aa12.69□□□□□ -0.38
MRPL28-201ENST00000199706 ZNF709Q8N972 641 aa12.69□□□□□ -0.38
MRPL28-201ENST00000199706 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms