RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 TIAM2Q8IVF5 1701 aa15.53■□□□□ 0.08
PHGDH-218ENST00000641491 COL4A5P29400 1685 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 MBD4O95243 580 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 MCCP23508 829 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 KIF4BQ2VIQ3 1234 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 ZMYM1Q5SVZ6 1142 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 TEX11Q8IYF3 940 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 MRIQ9BWK5 157 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 ANO2Q9NQ90 1003 aa15.52■□□□□ 0.08
PHGDH-218ENST00000641491 CCDC171Q6TFL3 1326 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 GPAA1O43292 621 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 TNNI2P48788 182 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 FAM227BQ96M60 508 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 ZDHHC15Q96MV8 337 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 VEZTQ9HBM0 779 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 ADARB2Q9NS39 739 aaKnown RBP15.51■□□□□ 0.07
PHGDH-218ENST00000641491 USP40Q9NVE5 1235 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 GPRC5DQ9NZD1 345 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 DAGLAQ9Y4D2 1042 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 MAST2Q6P0Q8 1798 aa15.51■□□□□ 0.07
PHGDH-218ENST00000641491 A0A0D9SFI3 127 aa15.5■□□□□ 0.07
PHGDH-218ENST00000641491 TDO2P48775 406 aa15.5■□□□□ 0.07
PHGDH-218ENST00000641491 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
PHGDH-218ENST00000641491 TBC1D10BQ4KMP7 808 aaPredicted RBP15.5■□□□□ 0.07
PHGDH-218ENST00000641491 ESYT1Q9BSJ8 1104 aa15.5■□□□□ 0.07
PHGDH-218ENST00000641491 TRIM34Q9BYJ4 488 aa15.5■□□□□ 0.07
PHGDH-218ENST00000641491 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
PHGDH-218ENST00000641491 SLC4A4Q9Y6R1 1079 aa15.5■□□□□ 0.07
PHGDH-218ENST00000641491 GAKO14976 1311 aa15.49■□□□□ 0.07
PHGDH-218ENST00000641491 ZNF280AP59817 542 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-218ENST00000641491 GRIK5Q16478 980 aa15.49■□□□□ 0.07
PHGDH-218ENST00000641491 EAPPQ56P03 285 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-218ENST00000641491 PNMA8AQ86V59 439 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-218ENST00000641491 FAM163AQ96GL9 167 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-218ENST00000641491 GPR75-ASB3A0A0A6YYF3 556 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 TCRBV5S4A2TA0A5A2 114 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 SPDYE2BA6NHP3 402 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 M0R2C6 588 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 SPDYE6P0CI01 402 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 EPHX2P34913 555 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 PICALMQ13492 652 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 OSBP2Q969R2 916 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 L3MBTL3Q96JM7 780 aaPredicted RBP15.48■□□□□ 0.07
PHGDH-218ENST00000641491 GMLQ99445 158 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 PUS7LQ9H0K6 701 aaKnown RBP15.48■□□□□ 0.07
PHGDH-218ENST00000641491 NAPBQ9H115 298 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 PRDM10Q9NQV6 1147 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 CTNNA3Q9UI47 895 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 CLEC11AQ9Y240 323 aa15.48■□□□□ 0.07
PHGDH-218ENST00000641491 AK9Q5TCS8 1911 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 AKAP11Q9UKA4 1901 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 DICER1Q9UPY3 1922 aaKnown RBP15.47■□□□□ 0.07
PHGDH-218ENST00000641491 POTECB2RU33 542 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 SGSM2O43147 1006 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 SLC3A2P08195 630 aaKnown RBP15.47■□□□□ 0.07
PHGDH-218ENST00000641491 DYNLL1P63167 89 aaKnown RBP15.47■□□□□ 0.07
PHGDH-218ENST00000641491 RNF20Q5VTR2 975 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 CCDC129Q6ZRS4 1044 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 USP50Q70EL3 339 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-218ENST00000641491 APOBEC3FQ8IUX4 373 aaKnown RBP15.47■□□□□ 0.07
PHGDH-218ENST00000641491 ZSCAN29Q8IWY8 852 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-218ENST00000641491 LCORLQ8N3X6 602 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 MTMR14Q8NCE2 650 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
PHGDH-218ENST00000641491 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-218ENST00000641491 CLRN2A0PK11 232 aa15.46■□□□□ 0.07
PHGDH-218ENST00000641491 POLR3DP05423 398 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-218ENST00000641491 HLA-DOAP06340 250 aa15.46■□□□□ 0.07
PHGDH-218ENST00000641491 EPS15P42566 896 aa15.46■□□□□ 0.07
PHGDH-218ENST00000641491 PPP4CP60510 307 aa15.46■□□□□ 0.07
PHGDH-218ENST00000641491 SAMD7Q7Z3H4 446 aa15.46■□□□□ 0.07
PHGDH-218ENST00000641491 SH3RF3Q8TEJ3 882 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-218ENST00000641491 TGFBRAP1Q8WUH2 860 aa15.46■□□□□ 0.07
PHGDH-218ENST00000641491 DCPSQ96C86 337 aaKnown RBP15.46■□□□□ 0.07
PHGDH-218ENST00000641491 SEC62Q99442 399 aaKnown RBP15.46■□□□□ 0.07
PHGDH-218ENST00000641491 TDRD3Q9H7E2 651 aaKnown RBP15.46■□□□□ 0.07
PHGDH-218ENST00000641491 ATP8A2Q9NTI2 1148 aa15.46■□□□□ 0.07
PHGDH-218ENST00000641491 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-218ENST00000641491 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.06
PHGDH-218ENST00000641491 FOXN1O15353 648 aa15.45■□□□□ 0.06
PHGDH-218ENST00000641491 SLFNL1Q499Z3 407 aa15.45■□□□□ 0.06
PHGDH-218ENST00000641491 CDC42EP5Q6NZY7 148 aa15.45■□□□□ 0.06
PHGDH-218ENST00000641491 ADGRA1Q86SQ6 560 aa15.45■□□□□ 0.06
PHGDH-218ENST00000641491 MAPKAPK5Q8IW41 473 aa15.45■□□□□ 0.06
PHGDH-218ENST00000641491 SCN9AQ15858 1988 aa15.45■□□□□ 0.06
PHGDH-218ENST00000641491 TCP10L2B9ZVM9 353 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 PATL2C9JE40 543 aaKnown RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 WNT10BO00744 389 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 ZKSCAN1P17029 563 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 IMMTQ16891 758 aaKnown RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 APOBEC3HQ6NTF7 200 aaKnown RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 GIMAP6Q6P9H5 292 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 ZNF589Q86UQ0 364 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 SULF1Q8IWU6 871 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 STRBPQ96SI9 672 aaKnown RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 RIOK1Q9BRS2 568 aaKnown RBP15.44■□□□□ 0.06
PHGDH-218ENST00000641491 DSCC1Q9BVC3 393 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 MCM9Q9NXL9 1143 aa15.44■□□□□ 0.06
PHGDH-218ENST00000641491 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms