RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 RBM28Q9NW13 759 aaKnown RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 PDIA3P30101 505 aaKnown RBP9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 STAT6P42226 847 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 TICAM2Q86XR7 235 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 DNAJC10Q8IXB1 793 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 CALCOCO1Q9P1Z2 691 aa9.8□□□□□ -0.84
HNRNPU-219ENST00000639628 MYO1BO43795 1136 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 SMAP1Q8IYB5 467 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 DIS3L2Q8IYB7 885 aaKnown RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 TRIM47Q96LD4 638 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 ARFGAP3Q9NP61 516 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 PXDNLA1KZ92 1463 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 POLR3GO15318 223 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 KIF20AO95235 890 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 GSTO1P78417 241 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 PPP2R5BQ15173 497 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 LRRC24Q50LG9 513 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 CACNA2D4Q7Z3S7 1137 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 MROH5Q6ZUA9 1318 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 ZNF532Q9HCE3 1301 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 PCCAP05165 728 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 DDB1Q16531 1140 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 IQUBQ8NA54 791 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 MLKLQ8NB16 471 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 NSUN7Q8NE18 718 aaKnown RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 NLRP3Q96P20 1036 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 CD163L1Q9NR16 1453 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 A0A1W2PQ27 194 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 A0A1W2PQ64 194 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 A0A1W2PQD8 194 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 GOLGA6L10A6NI86 522 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 PSMA7O14818 248 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 TUBB4BP68371 445 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 CT47A1Q5JQC4 288 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 BAG1Q99933 345 aaPredicted RBP9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 ARMT1Q9H993 441 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 CABP5Q9NP86 173 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
HNRNPU-219ENST00000639628 FGAP02671 866 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 NBPF5PQ86XG9 351 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 ZKSCAN3Q9BRR0 538 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 STX8Q9UNK0 236 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 TECPR2O15040 1411 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 ZBTB38Q8NAP3 1195 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 FBXO18Q8NFZ0 1043 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 PCDHA7Q9UN72 937 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 CMA1P23946 247 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 CEP112Q8N8E3 955 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 TAF4BQ92750 862 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 DDX17Q92841 729 aaKnown RBP9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 PHKBQ93100 1093 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 LRRC27Q9C0I9 530 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 BCL2L12Q9HB09 334 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 RTEL1Q9NZ71 1219 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 RCOR1Q9UKL0 485 aa9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 NPHP4O75161 1426 aaPredicted RBP9.78□□□□□ -0.84
HNRNPU-219ENST00000639628 TSPY3P0CV98 308 aa9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 TSPY8P0CW00 308 aa9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 HMGB2P26583 209 aaKnown RBP9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 CDC25BP30305 580 aa9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 SPATA5Q8NB90 893 aa9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 ZNF526Q8TF50 670 aaPredicted RBP9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 GOLGA1Q92805 767 aa9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 ZSWIM4Q9H7M6 989 aa9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 EXOC1Q9NV70 894 aa9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 USP42Q9H9J4 1324 aaKnown RBP9.77□□□□□ -0.84
HNRNPU-219ENST00000639628 TMEM131LA2VDJ0 1609 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 IGKV5-2P06315 115 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 PFKFB1P16118 471 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 TRIM21P19474 475 aaKnown RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 CYLC1P35663 651 aaPredicted RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 PAFAH1B1P43034 410 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 LRMPQ12912 555 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 CNGA4Q8IV77 575 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 KIAA1524Q8TCG1 905 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 RPGRQ92834 1020 aaKnown RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 DENND2AQ9ULE3 1009 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 MAST3O60307 1309 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 ZMYM6O95789 1325 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 CTAGE15A4D2H0 777 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 ERLIN2O94905 339 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 CTAGE8P0CG41 777 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 CTSWP56202 376 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 STX17P56962 302 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 FAM193AP78312 1265 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 RBM6P78332 1123 aaKnown RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 AKNAD1Q5T1N1 836 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 CTAGE6Q86UF2 777 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 CTAGE4Q8IX94 777 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 XPO4Q9C0E2 1151 aaKnown RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 PATL2C9JE40 543 aaKnown RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 AKR1B15C9JRZ8 316 aaPredicted RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 ARHGAP6O43182 974 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 SYCP1Q15431 976 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 LRRC8AQ8IWT6 810 aa9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 ZSCAN29Q8IWY8 852 aaPredicted RBP9.77□□□□□ -0.85
HNRNPU-219ENST00000639628 ALS2CR12Q96Q35 445 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms