RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
CCDC7-212ENST00000639041 CYP11A1P05108 521 aa11.29□□□□□ -0.6
CCDC7-212ENST00000639041 CTSBP07858 339 aa11.29□□□□□ -0.6
CCDC7-212ENST00000639041 ZNF385CQ66K41 422 aaPredicted RBP11.29□□□□□ -0.6
CCDC7-212ENST00000639041 GAL3ST3Q96A11 431 aa11.29□□□□□ -0.6
CCDC7-212ENST00000639041 DNAJC2Q99543 621 aaKnown RBP11.29□□□□□ -0.6
CCDC7-212ENST00000639041 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
CCDC7-212ENST00000639041 DGKGP49619 791 aa11.28□□□□□ -0.6
CCDC7-212ENST00000639041 TREML4Q6UXN2 200 aa11.28□□□□□ -0.6
CCDC7-212ENST00000639041 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.28□□□□□ -0.6
CCDC7-212ENST00000639041 GATAD2BQ8WXI9 593 aa11.28□□□□□ -0.6
CCDC7-212ENST00000639041 ACSBG1Q96GR2 724 aa11.28□□□□□ -0.6
CCDC7-212ENST00000639041 FAM221AA4D161 298 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 DEAF1O75398 565 aaPredicted RBP11.27□□□□□ -0.61
CCDC7-212ENST00000639041 FGRP09769 529 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 MCM4P33991 863 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 CDK8P49336 464 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 PDE3AQ14432 1141 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
CCDC7-212ENST00000639041 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 GPBAR1Q8TDU6 330 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 CCDC86Q9H6F5 360 aaKnown RBP11.27□□□□□ -0.61
CCDC7-212ENST00000639041 KCNK4Q9NYG8 393 aa11.27□□□□□ -0.61
CCDC7-212ENST00000639041 ADAM11O75078 769 aa11.26□□□□□ -0.61
CCDC7-212ENST00000639041 CCDC84Q86UT8 332 aaPredicted RBP11.26□□□□□ -0.61
CCDC7-212ENST00000639041 NRSN2Q9GZP1 204 aa11.26□□□□□ -0.61
CCDC7-212ENST00000639041 PCDHA4Q9UN74 947 aa11.26□□□□□ -0.61
CCDC7-212ENST00000639041 TM4SF5O14894 197 aa11.25□□□□□ -0.61
CCDC7-212ENST00000639041 CILPO75339 1184 aa11.25□□□□□ -0.61
CCDC7-212ENST00000639041 TRIM37O94972 964 aa11.25□□□□□ -0.61
CCDC7-212ENST00000639041 SSBP05455 408 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC7-212ENST00000639041 LIG1P18858 919 aa11.25□□□□□ -0.61
CCDC7-212ENST00000639041 CD68P34810 354 aaPredicted RBP11.25□□□□□ -0.61
CCDC7-212ENST00000639041 SNRPNP63162 240 aaKnown RBP11.25□□□□□ -0.61
CCDC7-212ENST00000639041 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
CCDC7-212ENST00000639041 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
CCDC7-212ENST00000639041 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
CCDC7-212ENST00000639041 SPATA32Q96LK8 384 aa11.25□□□□□ -0.61
CCDC7-212ENST00000639041 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
CCDC7-212ENST00000639041 BPNT1O95861 308 aa11.24□□□□□ -0.61
CCDC7-212ENST00000639041 CCDC81Q6ZN84 652 aa11.24□□□□□ -0.61
CCDC7-212ENST00000639041 ILDR2Q71H61 639 aa11.24□□□□□ -0.61
CCDC7-212ENST00000639041 SLITRK4Q8IW52 837 aa11.24□□□□□ -0.61
CCDC7-212ENST00000639041 WDR89Q96FK6 387 aaPredicted RBP11.24□□□□□ -0.61
CCDC7-212ENST00000639041 ENAMQ9NRM1 1142 aa11.24□□□□□ -0.61
CCDC7-212ENST00000639041 PPT2Q9UMR5 302 aa11.24□□□□□ -0.61
CCDC7-212ENST00000639041 DLGAP3O95886 979 aa11.23□□□□□ -0.61
CCDC7-212ENST00000639041 MPP2Q14168 576 aa11.23□□□□□ -0.61
CCDC7-212ENST00000639041 CPLX3Q8WVH0 158 aa11.23□□□□□ -0.61
CCDC7-212ENST00000639041 TRIM11Q96F44 468 aa11.23□□□□□ -0.61
CCDC7-212ENST00000639041 BRMS1Q9HCU9 246 aa11.23□□□□□ -0.61
CCDC7-212ENST00000639041 LOC100289279A0A1B0GTE1 492 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 FAM229AH3BQW9 127 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 ZNF862O60290 1169 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 STK10O94804 968 aaKnown RBP11.22□□□□□ -0.61
CCDC7-212ENST00000639041 CWF19L2Q2TBE0 894 aaKnown RBP11.22□□□□□ -0.61
CCDC7-212ENST00000639041 FBXW10Q5XX13 1052 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 DIEXFQ68CQ4 756 aaKnown RBP11.22□□□□□ -0.61
CCDC7-212ENST00000639041 PMFBP1Q8TBY8 1022 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 UBASH3BQ8TF42 649 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 PLVAPQ9BX97 442 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 ROBO2Q9HCK4 1378 aa11.22□□□□□ -0.61
CCDC7-212ENST00000639041 A0A0A0MRY4 1105 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 SOX9P48436 509 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 RPL6Q02878 288 aaKnown RBP11.21□□□□□ -0.61
CCDC7-212ENST00000639041 INPP5AQ14642 412 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 LINC00114Q6XXX2 140 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 GK5Q6ZS86 529 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 REC114Q7Z4M0 266 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 MAP4K3Q8IVH8 894 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 CSADQ9Y600 493 aa11.21□□□□□ -0.61
CCDC7-212ENST00000639041 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
CCDC7-212ENST00000639041 SELPP16109 830 aa11.2□□□□□ -0.62
CCDC7-212ENST00000639041 ANAPC16Q96DE5 110 aa11.2□□□□□ -0.62
CCDC7-212ENST00000639041 LRRC3Q9BY71 257 aa11.2□□□□□ -0.62
CCDC7-212ENST00000639041 CACNA2D2Q9NY47 1150 aa11.2□□□□□ -0.62
CCDC7-212ENST00000639041 DCDC2CA8MYV0 355 aa11.19□□□□□ -0.62
CCDC7-212ENST00000639041 RAC1P63000 192 aa11.19□□□□□ -0.62
CCDC7-212ENST00000639041 CLCQ05315 142 aa11.19□□□□□ -0.62
CCDC7-212ENST00000639041 WIPI1Q5MNZ9 446 aaPredicted RBP11.19□□□□□ -0.62
CCDC7-212ENST00000639041 LCE2AQ5TA79 106 aaPredicted RBP11.19□□□□□ -0.62
CCDC7-212ENST00000639041 LRFN4Q6PJG9 635 aa11.19□□□□□ -0.62
CCDC7-212ENST00000639041 PLPPR2Q96GM1 343 aa11.19□□□□□ -0.62
CCDC7-212ENST00000639041 FERD3LQ96RJ6 166 aa11.19□□□□□ -0.62
CCDC7-212ENST00000639041 KRT82Q9NSB4 513 aa11.19□□□□□ -0.62
CCDC7-212ENST00000639041 WISP1O95388 367 aa11.18□□□□□ -0.62
CCDC7-212ENST00000639041 ETFBP38117 255 aa11.18□□□□□ -0.62
CCDC7-212ENST00000639041 COL9A2Q14055 689 aaPredicted RBP11.18□□□□□ -0.62
CCDC7-212ENST00000639041 DUOXA2Q1HG44 320 aa11.18□□□□□ -0.62
CCDC7-212ENST00000639041 FBXO11Q86XK2 927 aa11.18□□□□□ -0.62
CCDC7-212ENST00000639041 FMR1NBQ8N0W7 255 aaPredicted RBP11.18□□□□□ -0.62
CCDC7-212ENST00000639041 DTWD1Q8N5C7 304 aa11.18□□□□□ -0.62
CCDC7-212ENST00000639041 SRRTQ9BXP5 876 aaKnown RBP11.18□□□□□ -0.62
CCDC7-212ENST00000639041 ZNF408Q9H9D4 720 aa11.18□□□□□ -0.62
CCDC7-212ENST00000639041 RAD18Q9NS91 495 aa11.18□□□□□ -0.62
CCDC7-212ENST00000639041 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
CCDC7-212ENST00000639041 DLL1O00548 723 aa11.17□□□□□ -0.62
CCDC7-212ENST00000639041 ARHGEF15O94989 841 aa11.17□□□□□ -0.62
CCDC7-212ENST00000639041 ZNF165P49910 485 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms