RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 UBE2Q2LH0YL09 131 aa26.61■■□□□ 1.85
SCN1B-206ENST00000638536 JMYQ8N9B5 988 aa26.61■■□□□ 1.85
SCN1B-206ENST00000638536 USP40Q9NVE5 1235 aa26.61■■□□□ 1.85
SCN1B-206ENST00000638536 PPP2R3BQ9Y5P8 575 aa26.61■■□□□ 1.85
SCN1B-206ENST00000638536 HDAC1Q13547 482 aaPredicted RBP26.6■■□□□ 1.85
SCN1B-206ENST00000638536 ADGRA1Q86SQ6 560 aa26.6■■□□□ 1.85
SCN1B-206ENST00000638536 EDC3Q96F86 508 aaKnown RBP26.6■■□□□ 1.85
SCN1B-206ENST00000638536 CAPNS2Q96L46 248 aa26.6■■□□□ 1.85
SCN1B-206ENST00000638536 WDR33Q9C0J8 1336 aaKnown RBP26.59■■□□□ 1.85
SCN1B-206ENST00000638536 BTDP43251 543 aa26.59■■□□□ 1.85
SCN1B-206ENST00000638536 TNFAIP1Q13829 316 aa26.59■■□□□ 1.85
SCN1B-206ENST00000638536 MAST2Q6P0Q8 1798 aa26.59■■□□□ 1.85
SCN1B-206ENST00000638536 IGHDP01880 384 aa26.58■■□□□ 1.85
SCN1B-206ENST00000638536 BOLA2Q9H3K6 86 aa26.58■■□□□ 1.85
SCN1B-206ENST00000638536 FAM198AQ9UFP1 575 aa26.58■■□□□ 1.85
SCN1B-206ENST00000638536 GPR75-ASB3A0A0A6YYF3 556 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 TCP10Q12799 353 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 AAMPQ13685 434 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 TTLL12Q14166 644 aaPredicted RBP26.57■■□□□ 1.84
SCN1B-206ENST00000638536 TSHZ3Q63HK5 1081 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 ZFPM1Q8IX07 1006 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 OTUD7AQ8TE49 926 aaPredicted RBP26.57■■□□□ 1.84
SCN1B-206ENST00000638536 HHIPL1Q96JK4 782 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 AOC2O75106 756 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 RHBDL3P58872 404 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 FKBP1CQ5VVH2 108 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 SLF2Q8IX21 1173 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.57■■□□□ 1.84
SCN1B-206ENST00000638536 ZIC5Q96T25 663 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 DNAJC2Q99543 621 aaKnown RBP26.57■■□□□ 1.84
SCN1B-206ENST00000638536 TMOD2Q9NZR1 351 aa26.57■■□□□ 1.84
SCN1B-206ENST00000638536 IDH1O75874 414 aaKnown RBP26.56■■□□□ 1.84
SCN1B-206ENST00000638536 ATP5JP18859 108 aa26.56■■□□□ 1.84
SCN1B-206ENST00000638536 NF2P35240 595 aa26.56■■□□□ 1.84
SCN1B-206ENST00000638536 FKBP1BP68106 108 aa26.56■■□□□ 1.84
SCN1B-206ENST00000638536 TNNI2P48788 182 aa26.55■■□□□ 1.84
SCN1B-206ENST00000638536 NAA16Q6N069 864 aaPredicted RBP26.55■■□□□ 1.84
SCN1B-206ENST00000638536 RGMBQ6NW40 437 aa26.55■■□□□ 1.84
SCN1B-206ENST00000638536 FAM83AQ86UY5 434 aa26.55■■□□□ 1.84
SCN1B-206ENST00000638536 ANGEL1Q9UNK9 670 aaKnown RBP26.55■■□□□ 1.84
SCN1B-206ENST00000638536 CDK5RAP2Q96SN8 1893 aa26.55■■□□□ 1.84
SCN1B-206ENST00000638536 FAM155AB1AL88 458 aaPredicted RBP26.54■■□□□ 1.84
SCN1B-206ENST00000638536 GOLIM4O00461 696 aa26.54■■□□□ 1.84
SCN1B-206ENST00000638536 WDHD1O75717 1129 aaPredicted RBP26.54■■□□□ 1.84
SCN1B-206ENST00000638536 GSTO1P78417 241 aa26.54■■□□□ 1.84
SCN1B-206ENST00000638536 SUPT20HL1Q3ZLR7 823 aa26.54■■□□□ 1.84
SCN1B-206ENST00000638536 DDX4Q9NQI0 724 aaKnown RBP26.54■■□□□ 1.84
SCN1B-206ENST00000638536 RFX7Q2KHR2 1363 aa26.54■■□□□ 1.84
SCN1B-206ENST00000638536 USP2O75604 605 aaPredicted RBP26.54■■□□□ 1.84
SCN1B-206ENST00000638536 LDHCP07864 332 aa26.54■■□□□ 1.84
SCN1B-206ENST00000638536 ZNF157P51786 506 aaPredicted RBP26.54■■□□□ 1.84
SCN1B-206ENST00000638536 OTOFQ9HC10 1997 aa26.53■■□□□ 1.84
SCN1B-206ENST00000638536 ANKRD45Q5TZF3 282 aa26.53■■□□□ 1.84
SCN1B-206ENST00000638536 FAM151AQ8WW52 585 aa26.53■■□□□ 1.84
SCN1B-206ENST00000638536 AATFQ9NY61 560 aaKnown RBP eCLIP26.53■■□□□ 1.84
SCN1B-206ENST00000638536 RGS3P49796 1198 aa26.52■■□□□ 1.84
SCN1B-206ENST00000638536 MAGEB6Q8N7X4 407 aa26.52■■□□□ 1.84
SCN1B-206ENST00000638536 HAUS7Q99871 368 aa26.52■■□□□ 1.84
SCN1B-206ENST00000638536 IDI2Q9BXS1 227 aa26.52■■□□□ 1.84
SCN1B-206ENST00000638536 ECE1P42892 770 aa26.51■■□□□ 1.83
SCN1B-206ENST00000638536 LDLRAD1Q5T700 205 aa26.51■■□□□ 1.83
SCN1B-206ENST00000638536 ARMC9Q7Z3E5 817 aa26.51■■□□□ 1.83
SCN1B-206ENST00000638536 SH3RF3Q8TEJ3 882 aaPredicted RBP26.51■■□□□ 1.83
SCN1B-206ENST00000638536 GCC1Q96CN9 775 aa26.51■■□□□ 1.83
SCN1B-206ENST00000638536 ECHDC1Q9NTX5 307 aa26.51■■□□□ 1.83
SCN1B-206ENST00000638536 THSD7BQ9C0I4 1608 aa26.51■■□□□ 1.83
SCN1B-206ENST00000638536 CYP7A1P22680 504 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 PICALMQ13492 652 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 MAP3K11Q16584 847 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 SLFNL1Q499Z3 407 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 SH3BP5LQ7L8J4 393 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 CLMNQ96JQ2 1002 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 PAG1Q9NWQ8 432 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 PPP1R12BO60237 982 aaPredicted RBP26.5■■□□□ 1.83
SCN1B-206ENST00000638536 CHGBP05060 677 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 DYNLL1P63167 89 aaKnown RBP26.5■■□□□ 1.83
SCN1B-206ENST00000638536 RASAL3Q86YV0 1011 aa26.5■■□□□ 1.83
SCN1B-206ENST00000638536 RWDD1Q9H446 243 aaPredicted RBP26.5■■□□□ 1.83
SCN1B-206ENST00000638536 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.5■■□□□ 1.83
SCN1B-206ENST00000638536 MYH7P12883 1935 aa26.49■■□□□ 1.83
SCN1B-206ENST00000638536 SLURP2P0DP57 97 aa26.49■■□□□ 1.83
SCN1B-206ENST00000638536 SMC5Q8IY18 1101 aa26.49■■□□□ 1.83
SCN1B-206ENST00000638536 SLC10A3P09131 477 aa26.48■■□□□ 1.83
SCN1B-206ENST00000638536 MAP3K12Q12852 859 aa26.48■■□□□ 1.83
SCN1B-206ENST00000638536 TTF1Q15361 905 aaPredicted RBP26.48■■□□□ 1.83
SCN1B-206ENST00000638536 B4GALNT3Q6L9W6 998 aa26.48■■□□□ 1.83
SCN1B-206ENST00000638536 MIGA2Q7L4E1 593 aa26.48■■□□□ 1.83
SCN1B-206ENST00000638536 MIGA1Q8NAN2 632 aa26.48■■□□□ 1.83
SCN1B-206ENST00000638536 SALL3Q9BXA9 1300 aa26.48■■□□□ 1.83
SCN1B-206ENST00000638536 FOCADQ5VW36 1801 aa26.48■■□□□ 1.83
SCN1B-206ENST00000638536 RPAP1Q9BWH6 1393 aaPredicted RBP26.48■■□□□ 1.83
SCN1B-206ENST00000638536 DDTLA6NHG4 134 aaPredicted RBP26.47■■□□□ 1.83
SCN1B-206ENST00000638536 PPP4CP60510 307 aa26.47■■□□□ 1.83
SCN1B-206ENST00000638536 ENTPD3O75355 529 aa26.46■■□□□ 1.83
SCN1B-206ENST00000638536 PDE6AP16499 860 aa26.46■■□□□ 1.83
SCN1B-206ENST00000638536 SLC9C2Q5TAH2 1124 aa26.46■■□□□ 1.83
SCN1B-206ENST00000638536 TEX11Q8IYF3 940 aa26.46■■□□□ 1.83
SCN1B-206ENST00000638536 PI4K2BQ8TCG2 481 aa26.46■■□□□ 1.83
SCN1B-206ENST00000638536 CCDC102AQ96A19 550 aa26.46■■□□□ 1.83
SCN1B-206ENST00000638536 TCRBV5S4A2TA0A5A2 114 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms