RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ARID5AQ03989 594 aa16.3■□□□□ 0.2
SCARB2-208ENST00000638372 DBNLQ9UJU6 430 aaKnown RBP16.3■□□□□ 0.2
SCARB2-208ENST00000638372 KCNJ14Q9UNX9 436 aa16.3■□□□□ 0.2
SCARB2-208ENST00000638372 ADCK5Q3MIX3 580 aa16.3■□□□□ 0.2
SCARB2-208ENST00000638372 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
SCARB2-208ENST00000638372 CTSWP56202 376 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 ZNF445P59923 1031 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 HS1BP3Q53T59 392 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 MAPK8IP1Q9UQF2 711 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 SPDYE3A6NKU9 549 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 ANKRD62A6NC57 917 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
SCARB2-208ENST00000638372 KARSQ15046 597 aaKnown RBP16.29■□□□□ 0.2
SCARB2-208ENST00000638372 STXBP4Q6ZWJ1 553 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 HDAC9Q9UKV0 1011 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
SCARB2-208ENST00000638372 CETN2P41208 172 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
SCARB2-208ENST00000638372 ZBTB9Q96C00 473 aa16.29■□□□□ 0.2
SCARB2-208ENST00000638372 PARP1P09874 1014 aaKnown RBP16.28■□□□□ 0.2
SCARB2-208ENST00000638372 GPCPD1Q9NPB8 672 aa16.28■□□□□ 0.2
SCARB2-208ENST00000638372 LZTFL1Q9NQ48 299 aa16.28■□□□□ 0.2
SCARB2-208ENST00000638372 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
SCARB2-208ENST00000638372 RRAGDQ9NQL2 400 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-208ENST00000638372 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
SCARB2-208ENST00000638372 CLSTN2Q9H4D0 955 aa16.28■□□□□ 0.2
SCARB2-208ENST00000638372 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
SCARB2-208ENST00000638372 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
SCARB2-208ENST00000638372 CYLC1P35663 651 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-208ENST00000638372 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
SCARB2-208ENST00000638372 ADD1P35611 737 aaKnown RBP16.28■□□□□ 0.2
SCARB2-208ENST00000638372 C17orf53Q8N3J3 647 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-208ENST00000638372 MROH5Q6ZUA9 1318 aa16.27■□□□□ 0.2
SCARB2-208ENST00000638372 RPS8P62241 208 aaKnown RBP16.27■□□□□ 0.2
SCARB2-208ENST00000638372 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
SCARB2-208ENST00000638372 NLRP1Q9C000 1473 aa16.27■□□□□ 0.2
SCARB2-208ENST00000638372 ZNF202O95125 648 aa16.27■□□□□ 0.2
SCARB2-208ENST00000638372 GYG1P46976 350 aa16.27■□□□□ 0.2
SCARB2-208ENST00000638372 UBXN1Q04323 297 aa16.27■□□□□ 0.2
SCARB2-208ENST00000638372 ZBTB38Q8NAP3 1195 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-208ENST00000638372 HAUS7Q99871 368 aa16.27■□□□□ 0.2
SCARB2-208ENST00000638372 DHX37Q8IY37 1157 aaKnown RBP16.27■□□□□ 0.19
SCARB2-208ENST00000638372 CMTR1Q8N1G2 835 aaKnown RBP16.27■□□□□ 0.19
SCARB2-208ENST00000638372 ZSWIM6Q9HCJ5 1215 aa16.27■□□□□ 0.19
SCARB2-208ENST00000638372 FGAP02671 866 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 CCDC175P0C221 793 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 CCT6AP40227 531 aaKnown RBP16.26■□□□□ 0.19
SCARB2-208ENST00000638372 BCAMP50895 628 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 GREM2Q9H772 168 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 ERBB3P21860 1342 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 ZCCHC11Q5TAX3 1644 aaKnown RBP16.26■□□□□ 0.19
SCARB2-208ENST00000638372 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 AKNAD1Q5T1N1 836 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 SYT10Q6XYQ8 523 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 STAMQ92783 540 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 OSBPL3Q9H4L5 887 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 MTMR6Q9Y217 621 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 PDE6AP16499 860 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 MAPKAPK5Q8IW41 473 aa16.26■□□□□ 0.19
SCARB2-208ENST00000638372 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 USP17L21D6R901 530 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 ADORA1P30542 326 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 FAM47AQ5JRC9 791 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-208ENST00000638372 EYA3Q99504 573 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 PCCAP05165 728 aaPredicted RBP16.25■□□□□ 0.19
SCARB2-208ENST00000638372 IFFO1Q0D2I5 559 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 WDR66Q8TBY9 1149 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 SDR42E1Q8WUS8 393 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
SCARB2-208ENST00000638372 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
SCARB2-208ENST00000638372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCARB2-208ENST00000638372 BCCIPQ9P287 314 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCARB2-208ENST00000638372 CCDC42Q96M95 316 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 VPS54Q9P1Q0 977 aa16.25■□□□□ 0.19
SCARB2-208ENST00000638372 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
SCARB2-208ENST00000638372 MCM3P25205 808 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 TRAF1Q13077 416 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 BICD1Q96G01 975 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 GUCA1BQ9UMX6 200 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 PHKA1P46020 1223 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 CCDC174Q6PII3 467 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 MAP4K1Q92918 833 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 KIF1BO60333 1816 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 SLU7O95391 586 aaKnown RBP16.24■□□□□ 0.19
SCARB2-208ENST00000638372 TFAP4Q01664 338 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 MCM6Q14566 821 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 UIMC1Q96RL1 719 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 VPS16Q9H269 839 aa16.24■□□□□ 0.19
SCARB2-208ENST00000638372 MYSM1Q5VVJ2 828 aa16.23■□□□□ 0.19
SCARB2-208ENST00000638372 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
SCARB2-208ENST00000638372 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms