RNA–Protein interactions for RNA: ENST00000638160.1

CHML-205, Transcript of CHM like, Rab escort protein 2, human

TSL 3 BASIC

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHML-205	ENST00000638160	FAM163A	Q96GL9	167 aa	Predicted RBP	32.98	■■■□□ 2.87
CHML-205	ENST00000638160	ZNF512B	Q96KM6	892 aa	Predicted RBP	32.98	■■■□□ 2.87
CHML-205	ENST00000638160	SSC5D	A1L4H1	1573 aa		32.97	■■■□□ 2.87
CHML-205	ENST00000638160	USP2	O75604	605 aa	Predicted RBP	32.97	■■■□□ 2.87
CHML-205	ENST00000638160	MCAM	P43121	646 aa		32.97	■■■□□ 2.87
CHML-205	ENST00000638160	LBX1	P52954	281 aa		32.97	■■■□□ 2.87
CHML-205	ENST00000638160	EAF2	Q96CJ1	260 aa	Predicted RBP	32.97	■■■□□ 2.87
CHML-205	ENST00000638160	FZD1	Q9UP38	647 aa		32.97	■■■□□ 2.87
CHML-205	ENST00000638160	PI16	Q6UXB8	463 aa		32.96	■■■□□ 2.87
CHML-205	ENST00000638160	SLC10A4	Q96EP9	437 aa		32.96	■■■□□ 2.87
CHML-205	ENST00000638160	CSRNP1	Q96S65	589 aa		32.96	■■■□□ 2.87
CHML-205	ENST00000638160	DBNL	Q9UJU6	430 aa	Known RBP	32.96	■■■□□ 2.87
CHML-205	ENST00000638160	GAK	O14976	1311 aa		32.96	■■■□□ 2.87
CHML-205	ENST00000638160	HOOK2	Q96ED9	719 aa		32.95	■■■□□ 2.87
CHML-205	ENST00000638160	USP40	Q9NVE5	1235 aa		32.95	■■■□□ 2.87
CHML-205	ENST00000638160	RHPN1	Q8TCX5	695 aa		32.94	■■■□□ 2.86
CHML-205	ENST00000638160	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.94	■■■□□ 2.86
CHML-205	ENST00000638160	MECOM	Q03112	1051 aa		32.93	■■■□□ 2.86
CHML-205	ENST00000638160	TBC1D9	Q6ZT07	1266 aa		32.93	■■■□□ 2.86
CHML-205	ENST00000638160	CDAN1	Q8IWY9	1227 aa		32.93	■■■□□ 2.86
CHML-205	ENST00000638160	GSTO1	P78417	241 aa		32.92	■■■□□ 2.86
CHML-205	ENST00000638160	ANKRD13A	Q8IZ07	590 aa		32.92	■■■□□ 2.86
CHML-205	ENST00000638160	FAM151A	Q8WW52	585 aa		32.92	■■■□□ 2.86
CHML-205	ENST00000638160	KIF1BP	Q96EK5	621 aa		32.92	■■■□□ 2.86
CHML-205	ENST00000638160	RAB11FIP3	O75154	756 aa		32.91	■■■□□ 2.86
CHML-205	ENST00000638160	LDHC	P07864	332 aa		32.91	■■■□□ 2.86
CHML-205	ENST00000638160	RAI14	Q9P0K7	980 aa		32.91	■■■□□ 2.86
CHML-205	ENST00000638160	LRP2BP	Q9P2M1	347 aa		32.91	■■■□□ 2.86
CHML-205	ENST00000638160	AACS	Q86V21	672 aa		32.9	■■■□□ 2.86
CHML-205	ENST00000638160	NSUN4	Q96CB9	384 aa	Known RBP	32.9	■■■□□ 2.86
CHML-205	ENST00000638160	SNRK	Q9NRH2	765 aa		32.9	■■■□□ 2.86
CHML-205	ENST00000638160	SAGE1	Q9NXZ1	904 aa		32.9	■■■□□ 2.86
CHML-205	ENST00000638160	TLR7	Q9NYK1	1049 aa	Known RBP	32.9	■■■□□ 2.86
CHML-205	ENST00000638160	RPAP1	Q9BWH6	1393 aa	Predicted RBP	32.9	■■■□□ 2.86
CHML-205	ENST00000638160	MROH7-TTC4	A0A0A0MT08	1334 aa		32.89	■■■□□ 2.86
CHML-205	ENST00000638160	IGSF3	O75054	1194 aa		32.89	■■■□□ 2.86
CHML-205	ENST00000638160	SPRYD7	Q5W111	196 aa		32.89	■■■□□ 2.86
CHML-205	ENST00000638160	CLASRP	Q8N2M8	674 aa	Known RBP	32.89	■■■□□ 2.86
CHML-205	ENST00000638160	CLMN	Q96JQ2	1002 aa		32.89	■■■□□ 2.86
CHML-205	ENST00000638160	GPR75-ASB3	A0A0A6YYF3	556 aa		32.88	■■■□□ 2.85
CHML-205	ENST00000638160	NFIA	Q12857	509 aa		32.88	■■■□□ 2.85
CHML-205	ENST00000638160	IDI2	Q9BXS1	227 aa		32.88	■■■□□ 2.85
CHML-205	ENST00000638160	IL1RAPL2	Q9NP60	686 aa		32.88	■■■□□ 2.85
CHML-205	ENST00000638160	BTD	P43251	543 aa		32.87	■■■□□ 2.85
CHML-205	ENST00000638160	ZNF384	Q8TF68	577 aa		32.87	■■■□□ 2.85
CHML-205	ENST00000638160	RNF186	Q9NXI6	227 aa		32.87	■■■□□ 2.85
CHML-205	ENST00000638160	FAM198A	Q9UFP1	575 aa		32.87	■■■□□ 2.85
CHML-205	ENST00000638160	TSKS	Q9UJT2	592 aa		32.87	■■■□□ 2.85
CHML-205	ENST00000638160	MYH2	Q9UKX2	1941 aa		32.87	■■■□□ 2.85
CHML-205	ENST00000638160	ZBTB48	P10074	688 aa	Predicted RBP	32.86	■■■□□ 2.85
CHML-205	ENST00000638160	TM4SF4	P48230	202 aa		32.86	■■■□□ 2.85
CHML-205	ENST00000638160	RRP1	P56182	461 aa	Known RBP	32.86	■■■□□ 2.85
CHML-205	ENST00000638160	MAP3K9	P80192	1104 aa		32.86	■■■□□ 2.85
CHML-205	ENST00000638160	TCP10	Q12799	353 aa		32.86	■■■□□ 2.85
CHML-205	ENST00000638160	MKRN3	Q13064	507 aa	Known RBP	32.86	■■■□□ 2.85
CHML-205	ENST00000638160	DCAF15	Q66K64	600 aa		32.86	■■■□□ 2.85
CHML-205	ENST00000638160	APBB1	O00213	710 aa		32.85	■■■□□ 2.85
CHML-205	ENST00000638160	MAP4K4	O95819	1239 aa	Predicted RBP	32.85	■■■□□ 2.85
CHML-205	ENST00000638160	CYP2E1	P05181	493 aa	Predicted RBP	32.85	■■■□□ 2.85
CHML-205	ENST00000638160	TNS4	Q8IZW8	715 aa		32.85	■■■□□ 2.85
CHML-205	ENST00000638160	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	32.85	■■■□□ 2.85
CHML-205	ENST00000638160	WNK4	Q96J92	1243 aa		32.85	■■■□□ 2.85
CHML-205	ENST00000638160	ENTPD3	O75355	529 aa		32.84	■■■□□ 2.85
CHML-205	ENST00000638160	TRPA1	O75762	1119 aa		32.84	■■■□□ 2.85
CHML-205	ENST00000638160	ZAP70	P43403	619 aa		32.84	■■■□□ 2.85
CHML-205	ENST00000638160	SREBF2	Q12772	1141 aa		32.84	■■■□□ 2.85
CHML-205	ENST00000638160	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.84	■■■□□ 2.85
CHML-205	ENST00000638160	INHBE	P58166	350 aa		32.83	■■■□□ 2.85
CHML-205	ENST00000638160	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.83	■■■□□ 2.85
CHML-205	ENST00000638160	CSAD	Q9Y600	493 aa		32.83	■■■□□ 2.85
CHML-205	ENST00000638160	MANSC4	A6NHS7	340 aa	Predicted RBP	32.82	■■■□□ 2.84
CHML-205	ENST00000638160	RGS3	P49796	1198 aa		32.82	■■■□□ 2.84
CHML-205	ENST00000638160	IFIT2	P09913	472 aa	Known RBP	32.81	■■■□□ 2.84
CHML-205	ENST00000638160	RHBDL3	P58872	404 aa		32.81	■■■□□ 2.84
CHML-205	ENST00000638160	NAA16	Q6N069	864 aa	Predicted RBP	32.81	■■■□□ 2.84
CHML-205	ENST00000638160	ZNF341	Q9BYN7	854 aa		32.81	■■■□□ 2.84
CHML-205	ENST00000638160	AKAP11	Q9UKA4	1901 aa		32.81	■■■□□ 2.84
CHML-205	ENST00000638160	WDHD1	O75717	1129 aa	Predicted RBP	32.8	■■■□□ 2.84
CHML-205	ENST00000638160	VGLL4	Q14135	290 aa		32.8	■■■□□ 2.84
CHML-205	ENST00000638160	IFFO2	Q5TF58	517 aa		32.8	■■■□□ 2.84
CHML-205	ENST00000638160	ELP3	Q9H9T3	547 aa		32.8	■■■□□ 2.84
CHML-205	ENST00000638160	NPM3	O75607	178 aa	Known RBP	32.79	■■■□□ 2.84
CHML-205	ENST00000638160	MIGA2	Q7L4E1	593 aa		32.79	■■■□□ 2.84
CHML-205	ENST00000638160	ZFPM1	Q8IX07	1006 aa		32.79	■■■□□ 2.84
CHML-205	ENST00000638160	WRNIP1	Q96S55	665 aa		32.79	■■■□□ 2.84
CHML-205	ENST00000638160	NOL10	Q9BSC4	688 aa	Known RBP	32.79	■■■□□ 2.84
CHML-205	ENST00000638160	PIH1D3	Q9NQM4	214 aa	Known RBP	32.79	■■■□□ 2.84
CHML-205	ENST00000638160	RFX7	Q2KHR2	1363 aa		32.78	■■■□□ 2.84
CHML-205	ENST00000638160	BAG3	O95817	575 aa		32.77	■■■□□ 2.84
CHML-205	ENST00000638160	OPTN	Q96CV9	577 aa		32.77	■■■□□ 2.84
CHML-205	ENST00000638160	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	32.76	■■■□□ 2.83
CHML-205	ENST00000638160	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	32.76	■■■□□ 2.83
CHML-205	ENST00000638160	LRRCC1	Q9C099	1032 aa		32.76	■■■□□ 2.83
CHML-205	ENST00000638160	PLCG2	P16885	1265 aa		32.75	■■■□□ 2.83
CHML-205	ENST00000638160	GJA5	P36382	358 aa		32.75	■■■□□ 2.83
CHML-205	ENST00000638160	PPP4C	P60510	307 aa		32.75	■■■□□ 2.83
CHML-205	ENST00000638160	TMED8	Q6PL24	325 aa	Predicted RBP	32.75	■■■□□ 2.83
CHML-205	ENST00000638160	DDX4	Q9NQI0	724 aa	Known RBP	32.75	■■■□□ 2.83
CHML-205	ENST00000638160	ZNF112	Q9UJU3	913 aa		32.75	■■■□□ 2.83
CHML-205	ENST00000638160	ALDH1A1	P00352	501 aa		32.74	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms